RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 KCNT1Q5JUK3 1230 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 ZNF569Q5MCW4 686 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 TMEM215Q68D42 235 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 CXorf57Q6NSI4 855 aaKnown RBP13.42□□□□□ -0.26
CCDC42-202ENST00000539522 SCYL2Q6P3W7 929 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 KIAA0907Q7Z7F0 614 aaPredicted RBP13.42□□□□□ -0.26
CCDC42-202ENST00000539522 SLFN11Q7Z7L1 901 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 NLRP14Q86W24 1093 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 CHSY1Q86X52 802 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 CPA6Q8N4T0 437 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 FAM71BQ8TC56 605 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 CSGALNACT1Q8TDX6 532 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 CD101Q93033 1021 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 RNF34Q969K3 372 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 BBS2Q9BXC9 721 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 FOXQ1Q9C009 403 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 PAXBP1Q9Y5B6 917 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 CAPN6Q9Y6Q1 641 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 NYNRINQ9P2P1 1898 aaKnown RBP13.42□□□□□ -0.26
CCDC42-202ENST00000539522 F5P12259 2224 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 A0A0A0MRY4 1105 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 K7EQS6 105 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 PI15O43692 258 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 TBL1XO60907 577 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 LRIG2O94898 1065 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 ADH1CP00326 375 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 CD48P09326 243 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 COMTP21964 271 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 HLA-FP30511 346 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 HOXC13P31276 330 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 CASQ1P31415 396 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 L1CAMP32004 1257 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 MARCKSL1P49006 195 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 NAP1L1P55209 391 aaKnown RBP13.41□□□□□ -0.26
CCDC42-202ENST00000539522 GAD2Q05329 585 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 PON2Q15165 354 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 TMEM196Q5HYL7 178 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 SYT10Q6XYQ8 523 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 SND1Q7KZF4 910 aaKnown RBP eCLIP13.41□□□□□ -0.26
CCDC42-202ENST00000539522 RALGPS2Q86X27 583 aaPredicted RBP13.41□□□□□ -0.26
CCDC42-202ENST00000539522 TSC1Q92574 1164 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 ALG14Q96F25 216 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 KLC2Q9H0B6 622 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 MPP6Q9NZW5 540 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 OR12D3Q9UGF7 316 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 DNAI1Q9UI46 699 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 INTS6Q9UL03 887 aaKnown RBP13.41□□□□□ -0.26
CCDC42-202ENST00000539522 AP4E1Q9UPM8 1137 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 ALG6Q9Y672 507 aa13.41□□□□□ -0.26
CCDC42-202ENST00000539522 WDFY4Q6ZS81 3184 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 MACROD2A1Z1Q3 448 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 TMEM221A6NGB7 291 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 C3orf70A6NLC5 250 aaPredicted RBP13.4□□□□□ -0.26
CCDC42-202ENST00000539522 PRRT4C9JH25 899 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 M0R296 226 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 MOCS3O95396 460 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 EGFP01133 1207 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 CHRNB1P11230 501 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 CD70P32970 193 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 PRKCQQ04759 706 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 CCINQ13939 588 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 GAS6Q14393 721 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 GEN1Q17RS7 908 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 MPPE1Q53F39 396 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 MPP7Q5T2T1 576 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 ERMARDQ5T6L9 678 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 PKN3Q6P5Z2 889 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 CCDC105Q8IYK2 499 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 TRIM58Q8NG06 486 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 DDI1Q8WTU0 396 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 UBE2Q2Q8WVN8 375 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 FAM3CQ92520 227 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 ZNF592Q92610 1267 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 TMA16Q96EY4 203 aaKnown RBP13.4□□□□□ -0.26
CCDC42-202ENST00000539522 IRX2Q9BZI1 471 aaPredicted RBP13.4□□□□□ -0.26
CCDC42-202ENST00000539522 NOL6Q9H6R4 1146 aaKnown RBP13.4□□□□□ -0.26
CCDC42-202ENST00000539522 C8orf33Q9H7E9 229 aaPredicted RBP13.4□□□□□ -0.26
CCDC42-202ENST00000539522 ZWILCHQ9H900 591 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 TBC1D17Q9HA65 648 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 LTB4R2Q9NPC1 389 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 RBM12Q9NTZ6 932 aaKnown RBP13.4□□□□□ -0.26
CCDC42-202ENST00000539522 KLHL11Q9NVR0 708 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 C2orf42Q9NWW7 574 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 DLGAP2Q9P1A6 1054 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 STIM2Q9P246 746 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 MFHAS1Q9Y4C4 1052 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 OR51B4Q9Y5P0 310 aa13.4□□□□□ -0.26
CCDC42-202ENST00000539522 USP34Q70CQ2 3546 aa13.39□□□□□ -0.27
CCDC42-202ENST00000539522 FAM86C2PA6NEL3 165 aa13.39□□□□□ -0.27
CCDC42-202ENST00000539522 F5H5T6 163 aa13.39□□□□□ -0.27
CCDC42-202ENST00000539522 SRGAP2O75044 1071 aa13.39□□□□□ -0.27
CCDC42-202ENST00000539522 RNF8O76064 485 aa13.39□□□□□ -0.27
CCDC42-202ENST00000539522 LUC7L3O95232 432 aaKnown RBP13.39□□□□□ -0.27
CCDC42-202ENST00000539522 GOT1P17174 413 aa13.39□□□□□ -0.27
CCDC42-202ENST00000539522 NOP2P46087 812 aaKnown RBP13.39□□□□□ -0.27
CCDC42-202ENST00000539522 NUMBP49757 651 aa13.39□□□□□ -0.27
CCDC42-202ENST00000539522 AIF1P55008 147 aa13.39□□□□□ -0.27
CCDC42-202ENST00000539522 KDSRQ06136 332 aa13.39□□□□□ -0.27
CCDC42-202ENST00000539522 LMAN2Q12907 356 aa13.39□□□□□ -0.27
CCDC42-202ENST00000539522 MMRN1Q13201 1228 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms