RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 LUZP1Q86V48 1076 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 CCDC117Q8IWD4 279 aaPredicted RBP16.19■□□□□ 0.18
CIT-210ENST00000539413 TMEFF1Q8IYR6 380 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 EMC1Q8N766 993 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 IGSF8Q969P0 613 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 PGAP3Q96FM1 320 aaPredicted RBP16.19■□□□□ 0.18
CIT-210ENST00000539413 CFAP57Q96MR6 1250 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 AGPAT1Q99943 283 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 TKTL2Q9H0I9 626 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 TMEM245Q9H330 911 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 ARHGEF38Q9NXL2 777 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 VANGL2Q9ULK5 521 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 CYP8B1Q9UNU6 501 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 PLA2G4CQ9UP65 541 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 HS3ST4Q9Y661 456 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 ZNF292O60281 2723 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 GPR179Q6PRD1 2367 aa16.19■□□□□ 0.18
CIT-210ENST00000539413 IGHV1OR15-9A0A0B4J2B8 117 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 BCLAF3A2AJT9 711 aaKnown RBP16.18■□□□□ 0.18
CIT-210ENST00000539413 ZNF217O75362 1048 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 GJB6O95452 261 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 SERPINC1P01008 464 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 ATP5BP06576 529 aaKnown RBP16.18■□□□□ 0.18
CIT-210ENST00000539413 FERP16591 822 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 CSKP41240 450 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 IRAK1P51617 712 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 COPAP53621 1224 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 CENPCQ03188 943 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 PTP4A2Q12974 167 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 RSPO4Q2I0M5 234 aaPredicted RBP16.18■□□□□ 0.18
CIT-210ENST00000539413 PITRM1Q5JRX3 1037 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 BRMS1LQ5PSV4 323 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 RABGAP1LQ5R372 815 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 ARMCX6Q7L4S7 300 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 LPCAT2Q7L5N7 544 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 C14orf80Q86SX3 495 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 CCAR2Q8N163 923 aaKnown RBP16.18■□□□□ 0.18
CIT-210ENST00000539413 BAP1Q92560 729 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 TTC17Q96AE7 1141 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 RPRD1AQ96P16 312 aaPredicted RBP16.18■□□□□ 0.18
CIT-210ENST00000539413 SIK2Q9H0K1 926 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 WDCPQ9H6R7 721 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 PRDM16Q9HAZ2 1276 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 TMPRSS4Q9NRS4 437 aa16.18■□□□□ 0.18
CIT-210ENST00000539413 SEPT11Q9NVA2 429 aaKnown RBP16.18■□□□□ 0.18
CIT-210ENST00000539413 KIAA1522Q9P206 1035 aaPredicted RBP16.18■□□□□ 0.18
CIT-210ENST00000539413 A0A1W2PQC6 194 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 GDF9O60383 454 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 F9P00740 461 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 ZNF806P0C7X5 589 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 PTGER3P43115 390 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 CTSOP43234 321 aaPredicted RBP16.17■□□□□ 0.18
CIT-210ENST00000539413 NSFP46459 744 aaKnown RBP16.17■□□□□ 0.18
CIT-210ENST00000539413 NUMBP49757 651 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 RPL6Q02878 288 aaKnown RBP16.17■□□□□ 0.18
CIT-210ENST00000539413 MTA1Q13330 715 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 CAMK2GQ13555 558 aaPredicted RBP16.17■□□□□ 0.18
CIT-210ENST00000539413 ZSCAN23Q3MJ62 389 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 TTC39BQ5VTQ0 682 aaPredicted RBP16.17■□□□□ 0.18
CIT-210ENST00000539413 SND1Q7KZF4 910 aaKnown RBP eCLIP16.17■□□□□ 0.18
CIT-210ENST00000539413 ARCQ7LC44 396 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 BNIPLQ7Z465 357 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 IRF2BP2Q7Z5L9 587 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 CACUL1Q86Y37 369 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 TMPRSS6Q8IU80 811 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 APCDD1Q8J025 514 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 DEFB119Q8N690 84 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 JOSD2Q8TAC2 188 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 MYO19Q96H55 970 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 MRGPRX3Q96LB0 322 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 MTG2Q9H4K7 406 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 VPS45Q9NRW7 570 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 ADAM22Q9P0K1 906 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 SNX10Q9Y5X0 201 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 WDR87Q6ZQQ6 2873 aa16.17■□□□□ 0.18
CIT-210ENST00000539413 PLXND1Q9Y4D7 1925 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.16■□□□□ 0.18
CIT-210ENST00000539413 A0A1B0GVM2 712 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 TCAF2A6NFQ2 919 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 LRRC53A6NM62 1247 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 PRR5-ARHGAP8B1AHC4 643 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 CAVIN2O95810 425 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 ASLP04424 464 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 PDGFRAP16234 1089 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 RDXP35241 583 aaKnown RBP16.16■□□□□ 0.18
CIT-210ENST00000539413 ARHGAP8P85298 464 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 ATP11AP98196 1134 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 NR1I3Q14994 352 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 PLEKHG6Q3KR16 790 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 RAB6CQ53S08 254 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 TCEAL6Q6IPX3 200 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 CXorf57Q6NSI4 855 aaKnown RBP16.16■□□□□ 0.18
CIT-210ENST00000539413 SLC36A4Q6YBV0 504 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 CYP2U1Q7Z449 544 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 METTL3Q86U44 580 aaKnown RBP16.16■□□□□ 0.18
CIT-210ENST00000539413 PHF13Q86YI8 300 aaPredicted RBP16.16■□□□□ 0.18
CIT-210ENST00000539413 C12orf50Q8NA57 414 aaPredicted RBP16.16■□□□□ 0.18
CIT-210ENST00000539413 OR2T3Q8NH03 318 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 RXFP2Q8WXD0 754 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 PRCCQ92733 491 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms