RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 TXLNGQ9NUQ3 528 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 SYBUQ9NX95 663 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 NCAM2O15394 837 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 T-ENOLP0DO92 83 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 CNTFP26441 200 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 TM4SF4P48230 202 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 GRIK3Q13003 919 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 KCNA10Q16322 511 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 ARL13BQ3SXY8 428 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 BSPRYQ5W0U4 402 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 ICE2Q659A1 982 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 CASC4Q6P4E1 433 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 PDZD4Q76G19 769 aaPredicted RBP14.39□□□□□ -0.11
LIMK1-208ENST00000538333 PID1Q7Z2X4 250 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 LRRTM3Q86VH5 581 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 OR10T2Q8NGX3 314 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 MAGEC3Q8TD91 643 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 DPF3Q92784 378 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 HDAC11Q96DB2 347 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 PGBD4Q96DM1 585 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 NAT9Q9BTE0 207 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 TRIM55Q9BYV6 548 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 WDCPQ9H6R7 721 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 KCNK13Q9HB14 408 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 SIRPGQ9P1W8 387 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 CHUKO15111 745 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 ATP5HO75947 161 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 CRHR1P34998 444 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 MNAT1P51948 309 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 ZNF135P52742 658 aaPredicted RBP14.39□□□□□ -0.11
LIMK1-208ENST00000538333 GALNT2Q10471 571 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 IFRD2Q12894 506 aaPredicted RBP14.39□□□□□ -0.11
LIMK1-208ENST00000538333 TUSC3Q13454 348 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 EIF4EBP2Q13542 120 aaPredicted RBP14.39□□□□□ -0.11
LIMK1-208ENST00000538333 TAC4Q86UU9 113 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 TMEM209Q96SK2 561 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 ADAM2Q99965 735 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 MECRQ9BV79 373 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 SLC13A1Q9BZW2 595 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 BRD8Q9H0E9 1235 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 TKTL2Q9H0I9 626 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 LRMDAQ9H2I8 198 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 CD248Q9HCU0 757 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 DMAP1Q9NPF5 467 aaPredicted RBP14.39□□□□□ -0.11
LIMK1-208ENST00000538333 PCMTD2Q9NV79 361 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 KLHL8Q9P2G9 620 aaPredicted RBP14.39□□□□□ -0.11
LIMK1-208ENST00000538333 SLC17A6Q9P2U8 582 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 OR12D3Q9UGF7 316 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 DCTN4Q9UJW0 460 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 SNX10Q9Y5X0 201 aa14.39□□□□□ -0.11
LIMK1-208ENST00000538333 LRIG2O94898 1065 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 AP2A1O95782 977 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 IGLV3-25P01717 112 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 ITGB1P05556 798 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 DLDP09622 509 aaKnown RBP14.38□□□□□ -0.11
LIMK1-208ENST00000538333 YY1P25490 414 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 CD68P34810 354 aaPredicted RBP14.38□□□□□ -0.11
LIMK1-208ENST00000538333 CAP1Q01518 475 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 PRKCZQ05513 592 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 OLIG2Q13516 323 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 CTC1Q2NKJ3 1217 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 CES4AQ5XG92 561 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 KCTD11Q693B1 232 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 METTL23Q86XA0 190 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 NDUFAF2Q8N183 169 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 SMC1BQ8NDV3 1235 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 ARMC2Q8NEN0 867 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 HASPINQ8TF76 798 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 RSPH1Q8WYR4 309 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 DSEQ9UL01 958 aa14.38□□□□□ -0.11
LIMK1-208ENST00000538333 FRMPD3Q5JV73 1810 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 TARSP26639 723 aaKnown RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 CST5P28325 142 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 CCND3P30281 292 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 GARSP41250 739 aaKnown RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 NAB1Q13506 487 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 TRIM71Q2Q1W2 868 aaKnown RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 PACS1Q6VY07 963 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 BEND5Q7L4P6 421 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 CLNKQ7Z7G1 428 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 ZNF598Q86UK7 904 aaKnown RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 ZSCAN18Q8TBC5 510 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 DQX1Q8TE96 717 aaKnown RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 UTP4Q969X6 686 aaKnown RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 SLC7A6OSQ96CW6 309 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 EPAS1Q99814 870 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 NOD2Q9HC29 1040 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 NEU3Q9UQ49 428 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 PSAT1Q9Y617 370 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 BRCA2P51587 3418 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 THSD7BQ9C0I4 1608 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 ZBTB24O43167 697 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 TOP3BO95985 862 aaKnown RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 ALDOAP04075 364 aaKnown RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 ZBTB17Q13105 803 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 TEX44Q53QW1 395 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 TAF1BQ53T94 588 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 FAM26DQ5JW98 314 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 OVOS1Q6IE37 1185 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms