RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TRPC5OSA6NMA1 111 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 USP12O75317 370 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 ABCB1P08183 1280 aaPredicted RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 FLOT2Q14254 428 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 TOMM20Q15388 145 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 C16orf89Q6UX73 402 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 LENG9Q96B70 501 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 PHF21BQ96EK2 531 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 PLEKHA8Q96JA3 519 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 ZYG11BQ9C0D3 744 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 SYTL2Q9HCH5 934 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 PTPRHQ9HD43 1115 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CRYL1Q9Y2S2 319 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 BUD23O43709 281 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 TLR5O60602 858 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 APOA4P06727 396 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 SPATA31C1P0DKV0 1188 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CTPS1P17812 591 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 TYMPP19971 482 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 NR2C2P49116 596 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CLCNKBP51801 687 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 BLVRAP53004 296 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 SLC16A1P53985 500 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 TUSC3Q13454 348 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 ATAT1Q5SQI0 421 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 TTC7BQ86TV6 843 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CCNJLQ8IV13 435 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 MSL3Q8N5Y2 521 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 TDRD5Q8NAT2 981 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 HJURPQ8NCD3 748 aaPredicted RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 MCRS1Q96EZ8 462 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 EXOC2Q96KP1 924 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 DACH2Q96NX9 599 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 ZIM3Q96PE6 472 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 THUMPD3Q9BV44 507 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 PPCSQ9HAB8 311 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 GID8Q9NWU2 228 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 PLK2Q9NYY3 685 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 NAALADL1Q9UQQ1 740 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CCNE2O96020 404 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 DNTTP04053 509 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 APODP05090 189 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 SERPINB5P36952 375 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 PRMT2P55345 433 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 RTP1P59025 263 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 OVGP1Q12889 678 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 CDKAL1Q5VV42 579 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 WDR59Q6PJI9 974 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 KCNT2Q6UVM3 1135 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 NPAS4Q8IUM7 802 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 CLEC4FQ8N1N0 589 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ZNF557Q8N988 423 aaPredicted RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 ECSITQ9BQ95 431 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ACTR8Q9H981 624 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 WHRNQ9P202 907 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 COL20A1Q9P218 1284 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 SCOCQ9UIL1 159 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ADAM21Q9UKJ8 722 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 C2CD2Q9Y426 696 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ATRNO75882 1429 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 RPTORQ8N122 1335 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 OR6C75A6NL08 312 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 GPR25O00155 361 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 FGF19O95750 216 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 CLTBP09497 229 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 PSEN1P49768 467 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 PWP1Q13610 501 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 PSRC1Q6PGN9 363 aaPredicted RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 PRUNE1Q86TP1 453 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 FAM35AQ86V20 835 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 RIBC1Q8N443 379 aaPredicted RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 NOA1Q8NC60 698 aaKnown RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 C3orf20Q8ND61 904 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ROPN1BQ9BZX4 212 aaPredicted RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 ADNPQ9H2P0 1102 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ELOVL6Q9H5J4 265 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ROPN1Q9HAT0 212 aaPredicted RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 MIEF1Q9NQG6 463 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ZMYM5Q9UJ78 669 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 RWDD3Q9Y3V2 267 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ARL5CA6NH57 179 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 MDM4O15151 490 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 FGF10O15520 208 aaPredicted RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 MAPK1P28482 360 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 MDH1P40925 334 aaKnown RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 CCNG2Q16589 344 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 SNAP47Q5SQN1 464 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 MFSD7Q6UXD7 560 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 TSHZ1Q6ZSZ6 1077 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 KIRREL3Q8IZU9 778 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 TOP6BLQ8N6T0 577 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 NETO2Q8NC67 525 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ZNF555Q8NEP9 628 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 OR6K2Q8NGY2 324 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 PAFAH2Q99487 392 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 SMAD5Q99717 465 aaKnown RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 ZCCHC17Q9NP64 241 aaKnown RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 TAS2R14Q9NYV8 317 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 GMIPQ9P107 970 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 SAE1Q9UBE0 346 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms