RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 RASSF2P50749 326 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ATXN3P54252 364 aaPredicted RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 EPHB1P54762 984 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ITGA9Q13797 1035 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ARHGAP36Q6ZRI8 547 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 SMC1BQ8NDV3 1235 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 FAM13CQ8NE31 585 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 CFAP61Q8NHU2 1237 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 UTP4Q969X6 686 aaKnown RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 B3GALT6Q96L58 329 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 QKIQ96PU8 341 aaKnown RBP eCLIP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ZIC5Q96T25 663 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ADAM2Q99965 735 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 XAB2Q9HCS7 855 aaKnown RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 BFARQ9NZS9 450 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 MPP6Q9NZW5 540 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 PLLPQ9Y342 182 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 RBM47A0AV96 593 aaKnown RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 DPYSL4O14531 572 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 ITM2AO43736 263 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 SKAP2O75563 359 aaPredicted RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 RFPL1O75677 317 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 MT-CYBP00156 380 aaPredicted RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 ITGB1P05556 798 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 CRYMQ14894 314 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 ARL13BQ3SXY8 428 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 ATG16L1Q676U5 607 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 PPP4R1Q8TF05 950 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 MZB1Q8WU39 189 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 KCNN1Q92952 543 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 EMID1Q96A84 441 aaPredicted RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 THTPAQ9BU02 230 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 NOP53Q9NZM5 478 aaKnown RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 SCAMP3O14828 347 aaKnown RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 PHGDHO43175 533 aaKnown RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 SOAT2O75908 522 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 T-ENOLP0DO92 83 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 RGS2P41220 211 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 MRPS6P82932 125 aaKnown RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 TAF11Q15544 211 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 NXNQ6DKJ4 435 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 ZNF534Q76KX8 674 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 METTL23Q86XA0 190 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 MIB1Q86YT6 1006 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 ZDHHC17Q8IUH5 632 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 NPWQ8N729 165 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 OXNAD1Q96HP4 312 aaPredicted RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 ZNF778Q96MU6 729 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 C20orf27Q9GZN8 174 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 ARHGEF3Q9NR81 526 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 PNPOQ9NVS9 261 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 KANSL3Q9P2N6 904 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 PCDHA11Q9Y5I1 949 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 GCATO75600 419 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 SPAG6O75602 509 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 POLBP06746 335 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 ALADP13716 330 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 ETFBP38117 255 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 USP4Q13107 963 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 LRRC36Q1X8D7 754 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 CST9Q5W186 159 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 BTBD8Q5XKL5 378 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 RINLQ6ZS11 566 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 BZW1Q7L1Q6 419 aaKnown RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 FBXO27Q8NI29 283 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 STMN2Q93045 179 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 NSL1Q96IY1 281 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 RSRC1Q96IZ7 334 aaKnown RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 HNRNPABQ99729 332 aaKnown RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 APBA2Q99767 749 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 PLAC1Q9HBJ0 212 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 TRMT13Q9NUP7 481 aaKnown RBP8.93□□□□□ -0.98
UBE3B-208ENST00000538070 PCDH10Q9P2E7 1040 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 VANGL2Q9ULK5 521 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 PADI3Q9ULW8 664 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 GABRQQ9UN88 632 aa8.93□□□□□ -0.98
UBE3B-208ENST00000538070 HTTP42858 3142 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 I6L893 689 aaPredicted RBP8.92□□□□□ -0.98
UBE3B-208ENST00000538070 CCL22O00626 93 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 LRIG2O94898 1065 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 PGM1P36871 562 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 OR1G1P47890 313 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 NR2C2P49116 596 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 PURAQ00577 322 aaKnown RBP8.92□□□□□ -0.98
UBE3B-208ENST00000538070 CDC42EP1Q00587 391 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 ZNF460Q14592 562 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 KPNB1Q14974 876 aaKnown RBP8.92□□□□□ -0.98
UBE3B-208ENST00000538070 ALKAL1Q6UXT8 129 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 PACS1Q6VY07 963 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 PDZD4Q76G19 769 aaPredicted RBP8.92□□□□□ -0.98
UBE3B-208ENST00000538070 C10orf107Q8IVU9 208 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 MICAL1Q8TDZ2 1067 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 TTC1Q99614 292 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 DENND2DQ9H6A0 471 aaPredicted RBP8.92□□□□□ -0.98
UBE3B-208ENST00000538070 DERAQ9Y315 318 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 C9IYK1 514 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 SMAPO00193 183 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 BUD23O43709 281 aaKnown RBP8.92□□□□□ -0.98
UBE3B-208ENST00000538070 ITGA2BP08514 1039 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms