RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 KCNK1O00180 336 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 NEFHP12036 1026 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 CYP2C18P33260 490 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 GALNT2Q10471 571 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 BMPR2Q13873 1038 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 GLB1LQ6UWU2 654 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 SPATA2LQ8IUW3 424 aaPredicted RBP16.09■□□□□ 0.17
MKS1-204ENST00000537529 TP53INP2Q8IXH6 220 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 NPWQ8N729 165 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 C10orf82Q8WW14 230 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 HDAC11Q96DB2 347 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 THOC1Q96FV9 657 aaKnown RBP16.09■□□□□ 0.17
MKS1-204ENST00000537529 TMEM209Q96SK2 561 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 TRHDEQ9UKU6 1024 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 THSD7BQ9C0I4 1608 aa16.08■□□□□ 0.17
MKS1-204ENST00000537529 RFPL1O75677 317 aa16.08■□□□□ 0.16
MKS1-204ENST00000537529 AMHP03971 560 aa16.08■□□□□ 0.16
MKS1-204ENST00000537529 EPHB2P29323 1055 aa16.08■□□□□ 0.16
MKS1-204ENST00000537529 SERPINB4P48594 390 aa16.08■□□□□ 0.16
MKS1-204ENST00000537529 ACLYP53396 1101 aa16.08■□□□□ 0.16
MKS1-204ENST00000537529 CRYMQ14894 314 aa16.08■□□□□ 0.16
MKS1-204ENST00000537529 ITPRIPL1Q6GPH6 555 aa16.08■□□□□ 0.16
MKS1-204ENST00000537529 CYB5D1Q6P9G0 228 aa16.08■□□□□ 0.16
MKS1-204ENST00000537529 LRRTM3Q86VH5 581 aa16.08■□□□□ 0.16
MKS1-204ENST00000537529 TRIM42Q8IWZ5 723 aa16.08■□□□□ 0.16
MKS1-204ENST00000537529 OXNAD1Q96HP4 312 aaPredicted RBP16.08■□□□□ 0.16
MKS1-204ENST00000537529 TSSK1BQ9BXA7 367 aa16.08■□□□□ 0.16
MKS1-204ENST00000537529 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.07■□□□□ 0.16
MKS1-204ENST00000537529 SKIV2L2P42285 1042 aaKnown RBP16.07■□□□□ 0.16
MKS1-204ENST00000537529 COG7P83436 770 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 NIPAL4Q0D2K0 466 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 TIFABQ6ZNK6 161 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 VAT1Q99536 393 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 OSBPL2Q9H1P3 480 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 GBA3Q9H227 469 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 ALG13Q9NP73 1137 aaKnown RBP16.07■□□□□ 0.16
MKS1-204ENST00000537529 RGS18Q9NS28 235 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 TXLNGQ9NUQ3 528 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 SYBUQ9NX95 663 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 RNF186Q9NXI6 227 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 PLLPQ9Y342 182 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 SNX10Q9Y5X0 201 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 ERI2A8K979 691 aaKnown RBP16.07■□□□□ 0.16
MKS1-204ENST00000537529 LRIG2O94898 1065 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 AP2A1O95782 977 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 IGLV3-25P01717 112 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 ITGB1P05556 798 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 GARSP41250 739 aaKnown RBP16.07■□□□□ 0.16
MKS1-204ENST00000537529 CRADDP78560 199 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 SP3Q02447 781 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 YWHAHQ04917 246 aaPredicted RBP16.07■□□□□ 0.16
MKS1-204ENST00000537529 URGCPQ8TCY9 931 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 ARNTL2Q8WYA1 636 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 LRRC37BQ96QE4 947 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 NPHS2Q9NP85 383 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 ABCC13Q9NSE7 274 aa16.07■□□□□ 0.16
MKS1-204ENST00000537529 TDRD15B5MCY1 1934 aaKnown RBP16.06■□□□□ 0.16
MKS1-204ENST00000537529 EOMESO95936 686 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 IL1BP01584 269 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 POLBP06746 335 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 SLC5A3P53794 718 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 SPANXN3Q5MJ09 141 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 BRMS1LQ5PSV4 323 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 MROH9Q5TGP6 573 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 BTBD8Q5XKL5 378 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 ZNF449Q6P9G9 518 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 PTPRN2Q92932 1015 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 TRIM55Q9BYV6 548 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 MYLK2Q9H1R3 596 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 PCMTD2Q9NV79 361 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 PIH1D1Q9NWS0 290 aaKnown RBP16.06■□□□□ 0.16
MKS1-204ENST00000537529 ARHGEF38Q9NXL2 777 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 C2CD2LO14523 706 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 KLF11O14901 512 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 HGSO14964 777 aaPredicted RBP16.06■□□□□ 0.16
MKS1-204ENST00000537529 IRAK2O43187 625 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 ATP5HO75947 161 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 CKBP12277 381 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 BGNP21810 368 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 HTR7P34969 479 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 GRIK1P39086 918 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 CAP1Q01518 475 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 CDHR3Q6ZTQ4 885 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 TBC1D1Q86TI0 1168 aaPredicted RBP16.06■□□□□ 0.16
MKS1-204ENST00000537529 RASSF3Q86WH2 238 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 PARP9Q8IXQ6 854 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 NDUFAF2Q8N183 169 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 ANKLE1Q8NAG6 615 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 SCAMP5Q8TAC9 235 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 ACMSDQ8TDX5 336 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 KLHL29Q96CT2 875 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 ERP27Q96DN0 273 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 GLT1D1Q96MS3 346 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 CHKBQ9Y259 395 aa16.06■□□□□ 0.16
MKS1-204ENST00000537529 F8W810 466 aa16.05■□□□□ 0.16
MKS1-204ENST00000537529 ZBTB24O43167 697 aaPredicted RBP16.05■□□□□ 0.16
MKS1-204ENST00000537529 CCNB1P14635 433 aa16.05■□□□□ 0.16
MKS1-204ENST00000537529 NQO1P15559 274 aaKnown RBP16.05■□□□□ 0.16
MKS1-204ENST00000537529 CRHR1P34998 444 aa16.05■□□□□ 0.16
MKS1-204ENST00000537529 ELF3P78545 371 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms