RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 DDIT4Q9NX09 232 aa9.57□□□□□ -0.88
UBE3B-207ENST00000537063 ARHGEF38Q9NXL2 777 aa9.57□□□□□ -0.88
UBE3B-207ENST00000537063 SIRPGQ9P1W8 387 aa9.57□□□□□ -0.88
UBE3B-207ENST00000537063 PCNTO95613 3336 aa9.57□□□□□ -0.88
UBE3B-207ENST00000537063 SYNJ2BP-COX16A0A087WUM0 186 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 CCND3P30281 292 aaPredicted RBP9.56□□□□□ -0.88
UBE3B-207ENST00000537063 MAPRE1Q15691 268 aaKnown RBP9.56□□□□□ -0.88
UBE3B-207ENST00000537063 FYB2Q5VWT5 728 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 CTU1Q7Z7A3 348 aaKnown RBP9.56□□□□□ -0.88
UBE3B-207ENST00000537063 METTL23Q86XA0 190 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 CTAGE3PQ8IX95 158 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 ACMSDQ8TDX5 336 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 GBA3Q9H227 469 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 COX16Q9P0S2 106 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 MAD1L1Q9Y6D9 718 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 ERI2A8K979 691 aaKnown RBP9.56□□□□□ -0.88
UBE3B-207ENST00000537063 AP2A1O95782 977 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 CYP2C18P33260 490 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 BRCC3P46736 316 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 TEX44Q53QW1 395 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 MANEALQ5VSG8 457 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 DCLRE1AQ6PJP8 1040 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 LRRTM3Q86VH5 581 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 SMC1BQ8NDV3 1235 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 ISL2Q96A47 359 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 ADAM2Q99965 735 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 LRMDAQ9H2I8 198 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 CASS4Q9NQ75 786 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 TRHDEQ9UKU6 1024 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 NYNRINQ9P2P1 1898 aaKnown RBP9.56□□□□□ -0.88
UBE3B-207ENST00000537063 TMEM88BA6NKF7 163 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 I3L4J1 428 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 TNFRSF10BO14763 440 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 CACNG3O60359 315 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 ATP5HO75947 161 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 POMCP01189 267 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 MGAT1P26572 445 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 CD68P34810 354 aaPredicted RBP9.56□□□□□ -0.88
UBE3B-207ENST00000537063 HTR7P34969 479 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 GARSP41250 739 aaKnown RBP9.56□□□□□ -0.88
UBE3B-207ENST00000537063 CDK18Q07002 472 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 SEPT7Q16181 437 aaKnown RBP9.56□□□□□ -0.88
UBE3B-207ENST00000537063 MAP3K21Q5TCX8 1036 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 BSPRYQ5W0U4 402 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 DQX1Q8TE96 717 aaKnown RBP9.56□□□□□ -0.88
UBE3B-207ENST00000537063 TSGA13Q96PP4 275 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 VAT1Q99536 393 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 EPAS1Q99814 870 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 TSSK1BQ9BXA7 367 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 KCNK13Q9HB14 408 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 TXLNGQ9NUQ3 528 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 SYBUQ9NX95 663 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 PCDHB8Q9UN66 801 aa9.56□□□□□ -0.88
UBE3B-207ENST00000537063 ARHGEF37A1IGU5 675 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 TMEM189-UBE2V1I3L0A0 370 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 BIRC5O15392 142 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 DNAJC6O75061 913 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 TROVE2P10155 538 aaKnown RBP eCLIP9.55□□□□□ -0.88
UBE3B-207ENST00000537063 MX2P20592 715 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 BDNFP23560 247 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 ALDH3A1P30838 453 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 MAGEA12P43365 314 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 KCNJ2P63252 427 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 DSC1Q08554 894 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 CTC1Q2NKJ3 1217 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 SPANXN3Q5MJ09 141 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 FAM91A1Q658Y4 838 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 PCSK9Q8NBP7 692 aaKnown RBP9.55□□□□□ -0.88
UBE3B-207ENST00000537063 NETO2Q8NC67 525 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 DEPDC1BQ8WUY9 529 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 ERP27Q96DN0 273 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 C7orf26Q96N11 449 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 LRRC37BQ96QE4 947 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 RGS18Q9NS28 235 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 SHROOM3Q8TF72 1996 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 MYO18AQ92614 2054 aaKnown RBP9.55□□□□□ -0.88
UBE3B-207ENST00000537063 TRAFD1O14545 582 aaPredicted RBP9.55□□□□□ -0.88
UBE3B-207ENST00000537063 CABYRO75952 493 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 B3GAT3O94766 335 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 LRIG2O94898 1065 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 DLDP09622 509 aaKnown RBP9.55□□□□□ -0.88
UBE3B-207ENST00000537063 SERPINB6P35237 376 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 IFRD2Q12894 506 aaPredicted RBP9.55□□□□□ -0.88
UBE3B-207ENST00000537063 BMPR2Q13873 1038 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 SETDB1Q15047 1291 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 PACS1Q6VY07 963 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 NLRP9Q7RTR0 991 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 CCNYQ8ND76 341 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 RFWD2Q8NHY2 731 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 TMEM237Q96Q45 408 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 TMEM209Q96SK2 561 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 MLPHQ9BV36 600 aaPredicted RBP9.55□□□□□ -0.88
UBE3B-207ENST00000537063 TKTL2Q9H0I9 626 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 SMOC2Q9H3U7 446 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 WDCPQ9H6R7 721 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 OR12D3Q9UGF7 316 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 NUMBLQ9Y6R0 609 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 VWA8A3KMH1 1905 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 IRAK2O43187 625 aa9.55□□□□□ -0.88
UBE3B-207ENST00000537063 SNNO75324 88 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms