RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ARL8BQ9NVJ2 186 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 ASIC5Q9NY37 505 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 AASSQ9UDR5 926 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 SYN3O14994 580 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 DHX16O60231 1041 aaKnown RBP5.94□□□□□ -1.46
PRKDC-208ENST00000536710 EIF5BO60841 1220 aaKnown RBP5.94□□□□□ -1.46
PRKDC-208ENST00000536710 CYP2D6P10635 497 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 ABCD3P28288 659 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 RARRES1P49788 294 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 B4GALNT1Q00973 533 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 KPNB1Q14974 876 aaKnown RBP5.94□□□□□ -1.46
PRKDC-208ENST00000536710 ZNF627Q7L945 461 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 TBC1D1Q86TI0 1168 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-208ENST00000536710 ENDOVQ8N8Q3 282 aaKnown RBP5.94□□□□□ -1.46
PRKDC-208ENST00000536710 TBC1D22AQ8WUA7 517 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 ZBTB10Q96DT7 871 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 RNFT2Q96EX2 444 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 MASTLQ96GX5 879 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 HIC2Q96JB3 615 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 FYTTD1Q96QD9 318 aaKnown RBP5.94□□□□□ -1.46
PRKDC-208ENST00000536710 NPAS1Q99742 590 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 HDHD5Q9BXW7 423 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 TAOK3Q9H2K8 898 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 IL21RQ9HBE5 538 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 KLQ9UEF7 1012 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 CYP46A1Q9Y6A2 500 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 ITIH6Q6UXX5 1313 aa5.94□□□□□ -1.46
PRKDC-208ENST00000536710 NPIPB13A6NJU9 1138 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 SH2D7A6NKC9 451 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-208ENST00000536710 NPIPB5A8MRT5 1133 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 NPIPB4C9JG80 1138 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 MGST3O14880 152 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 SPTLC2O15270 562 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 CCNT1O60563 726 aaKnown RBP5.93□□□□□ -1.46
PRKDC-208ENST00000536710 BAIAP3O94812 1187 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 RTN3O95197 1032 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-208ENST00000536710 CYP4B1P13584 511 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 INSRRP14616 1297 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 IGFBP2P18065 325 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 PRPH2P23942 346 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 MAN1A1P33908 653 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 HOXD12P35452 270 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 RXRGP48443 463 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 RPS6KA3P51812 740 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 SLC14A1Q13336 389 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 NAA25Q14CX7 972 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 LARS2Q15031 903 aaKnown RBP5.93□□□□□ -1.46
PRKDC-208ENST00000536710 PFKFB3Q16875 520 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-208ENST00000536710 GXYLT1Q4G148 440 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 GLE1Q53GS7 698 aaKnown RBP5.93□□□□□ -1.46
PRKDC-208ENST00000536710 AWAT1Q58HT5 328 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 FAM69AQ5T7M9 428 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 NAA35Q5VZE5 725 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 C4orf50Q6ZRC1 276 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 PCGF5Q86SE9 256 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 AMIGO2Q86SJ2 522 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 ADGRG6Q86SQ4 1221 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 CHD1LQ86WJ1 897 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 ARMC8Q8IUR7 673 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 ULK2Q8IYT8 1036 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 ADGRF3Q8IZF5 1079 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 RFFLQ8WZ73 363 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 KAZALD1Q96I82 304 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 NUAK2Q9H093 628 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 TOR3AQ9H497 397 aa5.93□□□□□ -1.46
PRKDC-208ENST00000536710 SIRT4Q9Y6E7 314 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-208ENST00000536710 H3BNC9 293 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 SMIM22K7EJ46 135 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 TNPO2O14787 897 aaKnown RBP5.92□□□□□ -1.46
PRKDC-208ENST00000536710 TSPAN4O14817 238 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 JTBO76095 146 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 CNTN5O94779 1100 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 METTL18O95568 372 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 CAPN3P20807 821 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 SFPQP23246 707 aaKnown RBP eCLIP5.92□□□□□ -1.46
PRKDC-208ENST00000536710 BDNFP23560 247 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 GSTM2P28161 218 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 ARHGAP8P85298 464 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 KRT32Q14532 448 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 PUM1Q14671 1186 aaKnown RBP eCLIP5.92□□□□□ -1.46
PRKDC-208ENST00000536710 BAK1Q16611 211 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 DHRS13Q6UX07 377 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 SCN4BQ8IWT1 228 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 GALNT4Q8N4A0 578 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 CAGE1Q8TC20 777 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 ADAMTS18Q8TE60 1221 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 CELF1Q92879 486 aaKnown RBP5.92□□□□□ -1.46
PRKDC-208ENST00000536710 ZNF845Q96IR2 970 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-208ENST00000536710 BBC3Q96PG8 261 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-208ENST00000536710 CD180Q99467 661 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 PHF7Q9BWX1 381 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-208ENST00000536710 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 INTS2Q9H0H0 1204 aaKnown RBP5.92□□□□□ -1.46
PRKDC-208ENST00000536710 VEZTQ9HBM0 779 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 ASB6Q9NWX5 421 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 SLC17A6Q9P2U8 582 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 SWAP70Q9UH65 585 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 FBXO2Q9UK22 296 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-208ENST00000536710 CAMK2AQ9UQM7 478 aa5.92□□□□□ -1.46
PRKDC-208ENST00000536710 SPATA31A1Q5TZJ5 1347 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms