RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ACVR2AP27037 513 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 IGHMBP2P38935 993 aaKnown RBP6.32□□□□□ -1.4
CLIP1-207ENST00000536634 BCAT1P54687 386 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 CHRNDQ07001 517 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 LMOD3Q0VAK6 560 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 CCNIQ14094 377 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 ARHGEF7Q14155 803 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 INSCQ1MX18 579 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 TMEM119Q4V9L6 283 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 CCDC146Q8IYE0 955 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.32□□□□□ -1.4
CLIP1-207ENST00000536634 ZKSCAN4Q969J2 545 aaPredicted RBP6.32□□□□□ -1.4
CLIP1-207ENST00000536634 ZBTB45Q96K62 511 aaPredicted RBP6.32□□□□□ -1.4
CLIP1-207ENST00000536634 C8orf48Q96LL4 319 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 DEFB118Q96PH6 123 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 TRIM5Q9C035 493 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 BTBD1Q9H0C5 482 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 ITGB1BP2Q9UKP3 347 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 CORO2BQ9UQ03 480 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 FRMD4BQ9Y2L6 1034 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 CHD9Q3L8U1 2897 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 CHD7Q9P2D1 2997 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 DDX60LQ5H9U9 1706 aaKnown RBP6.31□□□□□ -1.4
CLIP1-207ENST00000536634 PDHXO00330 501 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 PQBP1O60828 265 aaKnown RBP6.31□□□□□ -1.4
CLIP1-207ENST00000536634 NPSP0C0P6 89 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 HOXD10P28358 340 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 KCNJ4P48050 445 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 CARSP49589 748 aaKnown RBP6.31□□□□□ -1.4
CLIP1-207ENST00000536634 FKBP1AP62942 108 aaKnown RBP6.31□□□□□ -1.4
CLIP1-207ENST00000536634 UBXN2AP68543 259 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 HTRA4P83105 476 aaPredicted RBP6.31□□□□□ -1.4
CLIP1-207ENST00000536634 E2F1Q01094 437 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 PPIL2Q13356 520 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 TNFAIP1Q13829 316 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 SLC29A2Q14542 456 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 ERO1BQ86YB8 467 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 TDHQ8IZJ6 230 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 KRT78Q8N1N4 520 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 HASPINQ8TF76 798 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 PHKBQ93100 1093 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 TTC17Q96AE7 1141 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 LENG8Q96PV6 779 aaPredicted RBP6.31□□□□□ -1.4
CLIP1-207ENST00000536634 PRR25Q96S07 402 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 ANKRD2Q9GZV1 360 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 NUP62CLQ9H1M0 184 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 PNNQ9H307 717 aaKnown RBP6.31□□□□□ -1.4
CLIP1-207ENST00000536634 AS3MTQ9HBK9 375 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 FAM50BQ9Y247 325 aa6.31□□□□□ -1.4
CLIP1-207ENST00000536634 DRG1Q9Y295 367 aaKnown RBP6.31□□□□□ -1.4
CLIP1-207ENST00000536634 WDFY4Q6ZS81 3184 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 COL2A1P02458 1487 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-207ENST00000536634 AP4M1O00189 453 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 CD3EAPO15446 510 aaKnown RBP6.3□□□□□ -1.4
CLIP1-207ENST00000536634 RGS10O43665 173 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 WDHD1O75717 1129 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-207ENST00000536634 PIAS2O75928 621 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 JTBO76095 146 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 TFRCP02786 760 aaKnown RBP6.3□□□□□ -1.4
CLIP1-207ENST00000536634 HGFP14210 728 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 FPR3P25089 353 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 UQCRC1P31930 480 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 PIK3CBP42338 1070 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 CPT1AP50416 773 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 ZNF750Q32MQ0 723 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 L1TD1Q5T7N2 865 aaKnown RBP6.3□□□□□ -1.4
CLIP1-207ENST00000536634 C15orf52Q6ZUT6 534 aaKnown RBP6.3□□□□□ -1.4
CLIP1-207ENST00000536634 ZNF804AQ7Z570 1209 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 VOPP1Q96AW1 172 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 SNX22Q96L94 193 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 MPHOSPH8Q99549 860 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 THAP7Q9BT49 309 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-207ENST00000536634 DPCDQ9BVM2 203 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-207ENST00000536634 DHX36Q9H2U1 1008 aaKnown RBP6.3□□□□□ -1.4
CLIP1-207ENST00000536634 SNX13Q9Y5W8 968 aa6.3□□□□□ -1.4
CLIP1-207ENST00000536634 FAM205AQ6ZU69 1335 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 PTPRFP10586 1907 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 PIEZO1Q92508 2521 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 PI4KAP2A4QPH2 592 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 CGB1A6NKQ9 187 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 SMIM22K7EJ46 135 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 AGPSO00116 658 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 MT-ND5P03915 603 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 ZNF853P0CG23 659 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 SLC5A1P13866 664 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 BTF3P20290 206 aaKnown RBP6.29□□□□□ -1.4
CLIP1-207ENST00000536634 PRKAR1BP31321 381 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 SUMO4Q6EEV6 95 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 ZNF782Q6ZMW2 699 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-207ENST00000536634 ANKRD23Q86SG2 305 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 YAF2Q8IY57 180 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 PI4KAP1Q8N8J0 262 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 ABHD11Q8NFV4 315 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 CYP2W1Q8TAV3 490 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 DDB2Q92466 427 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 STRBPQ96SI9 672 aaKnown RBP6.29□□□□□ -1.4
CLIP1-207ENST00000536634 DKK4Q9UBT3 224 aa6.29□□□□□ -1.4
CLIP1-207ENST00000536634 LINC01548A6NM66 108 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 RHPN2P1A8MT19 583 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 PRKCGP05129 697 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms