RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 COL4A6Q14031 1691 aa23.33■■□□□ 1.32
HMGA2-206ENST00000536545 KCNU1A8MYU2 1149 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 NT5C1B-RDH14C9J2C7 533 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 EBAG9O00559 213 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 CPB1P15086 417 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 MSH2P43246 934 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 IFNAR2P48551 515 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 GPR17Q13304 367 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 TRIM60Q495X7 471 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 MPP5Q8N3R9 675 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 SLC44A1Q8WWI5 657 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 DPF3Q92784 378 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 EBNA1BP2Q99848 306 aaKnown RBP23.32■■□□□ 1.32
HMGA2-206ENST00000536545 GORASP1Q9BQQ3 440 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 CRISPLD1Q9H336 500 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 TMEM51Q9NW97 253 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 NUDT5Q9UKK9 219 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 FAM47DPA6NHR8 397 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 H7C4K7 107 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 MTSS1O43312 755 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 EFEMP2O95967 443 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 PRKCHP24723 683 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 SLC18A1P54219 525 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 SARNPP82979 210 aaKnown RBP23.32■■□□□ 1.32
HMGA2-206ENST00000536545 NRG1Q02297 640 aaPredicted RBP23.32■■□□□ 1.32
HMGA2-206ENST00000536545 TLE2Q04725 743 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 SMARCB1Q12824 385 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 UNC5AQ6ZN44 842 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 PRPF39Q86UA1 669 aaKnown RBP23.32■■□□□ 1.32
HMGA2-206ENST00000536545 PDCD7Q8N8D1 485 aaKnown RBP23.32■■□□□ 1.32
HMGA2-206ENST00000536545 SPPL2BQ8TCT7 592 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 DEPDC1BQ8WUY9 529 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 TOX2Q96NM4 488 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 CRISPLD2Q9H0B8 497 aa23.32■■□□□ 1.32
HMGA2-206ENST00000536545 KLHL8Q9P2G9 620 aaPredicted RBP23.32■■□□□ 1.32
HMGA2-206ENST00000536545 FGF10O15520 208 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-206ENST00000536545 ARPP19P56211 112 aa23.31■■□□□ 1.32
HMGA2-206ENST00000536545 LRRC8BQ6P9F7 803 aa23.31■■□□□ 1.32
HMGA2-206ENST00000536545 TBC1D31Q96DN5 1066 aa23.31■■□□□ 1.32
HMGA2-206ENST00000536545 SLC39A13Q96H72 371 aa23.31■■□□□ 1.32
HMGA2-206ENST00000536545 FCRL2Q96LA5 508 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-206ENST00000536545 SMC6Q96SB8 1091 aa23.31■■□□□ 1.32
HMGA2-206ENST00000536545 TTPALQ9BTX7 342 aa23.31■■□□□ 1.32
HMGA2-206ENST00000536545 OXCT2Q9BYC2 517 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-206ENST00000536545 SIK2Q9H0K1 926 aa23.31■■□□□ 1.32
HMGA2-206ENST00000536545 NKIRAS1Q9NYS0 192 aa23.31■■□□□ 1.32
HMGA2-206ENST00000536545 SMG5Q9UPR3 1016 aaKnown RBP23.31■■□□□ 1.32
HMGA2-206ENST00000536545 TLR6Q9Y2C9 796 aa23.31■■□□□ 1.32
HMGA2-206ENST00000536545 SOAT2O75908 522 aa23.3■■□□□ 1.32
HMGA2-206ENST00000536545 RWDD4Q6NW29 188 aaKnown RBP23.3■■□□□ 1.32
HMGA2-206ENST00000536545 RNF19BQ6ZMZ0 732 aa23.3■■□□□ 1.32
HMGA2-206ENST00000536545 ANKS3Q6ZW76 656 aa23.3■■□□□ 1.32
HMGA2-206ENST00000536545 TAS1R1Q7RTX1 841 aa23.3■■□□□ 1.32
HMGA2-206ENST00000536545 DEFB128Q7Z7B8 93 aa23.3■■□□□ 1.32
HMGA2-206ENST00000536545 CKAP2Q8WWK9 683 aa23.3■■□□□ 1.32
HMGA2-206ENST00000536545 SGSM3Q96HU1 749 aa23.3■■□□□ 1.32
HMGA2-206ENST00000536545 SPATA17Q96L03 361 aa23.3■■□□□ 1.32
HMGA2-206ENST00000536545 MLXIPLQ9NP71 852 aa23.3■■□□□ 1.32
HMGA2-206ENST00000536545 SSU72Q9NP77 194 aaKnown RBP23.3■■□□□ 1.32
HMGA2-206ENST00000536545 TBX21Q9UL17 535 aa23.3■■□□□ 1.32
HMGA2-206ENST00000536545 MYO18AQ92614 2054 aaKnown RBP23.3■■□□□ 1.32
HMGA2-206ENST00000536545 A0A1W2PPM1 405 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 TRDMT1O14717 391 aaKnown RBP23.29■■□□□ 1.32
HMGA2-206ENST00000536545 RTN3O95197 1032 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-206ENST00000536545 APOEP02649 317 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 SRGAP2BP0DMP2 458 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 HAPLN1P10915 354 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-206ENST00000536545 ZNF33AQ06730 810 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 ZBTB17Q13105 803 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 STEAP4Q687X5 459 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.29■■□□□ 1.32
HMGA2-206ENST00000536545 PID1Q7Z2X4 250 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 ARHGAP12Q8IWW6 846 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 C4orf33Q8N1A6 199 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 GPR152Q8TDT2 470 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 C2orf15Q8WU43 125 aaKnown RBP23.29■■□□□ 1.32
HMGA2-206ENST00000536545 DYDC1Q8WWB3 177 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 FBXO32Q969P5 355 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 CELF6Q96J87 481 aaKnown RBP23.29■■□□□ 1.32
HMGA2-206ENST00000536545 GBA3Q9H227 469 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 HS3ST4Q9Y661 456 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 MAD1L1Q9Y6D9 718 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 GREB1Q4ZG55 1949 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 TYROBPO43914 113 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 SPAG7O75391 227 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 YWHAQP27348 245 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 C1orf53Q5VUE5 145 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 LRRC34Q8IZ02 419 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 GSDMBQ8TAX9 411 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 DENND1AQ8TEH3 1009 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 VWCEQ96DN2 955 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 TRIM56Q9BRZ2 755 aaKnown RBP23.29■■□□□ 1.32
HMGA2-206ENST00000536545 CLIC5Q9NZA1 410 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 GGA2Q9UJY4 613 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 TRHDEQ9UKU6 1024 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 SLC27A5Q9Y2P5 690 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 PCDHA11Q9Y5I1 949 aa23.29■■□□□ 1.32
HMGA2-206ENST00000536545 CD68P34810 354 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-206ENST00000536545 WDR4P57081 412 aaKnown RBP23.28■■□□□ 1.32
HMGA2-206ENST00000536545 COG7P83436 770 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms