RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 ZBBXA8MT70 800 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 C12orf71A8MTZ7 269 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PDHXO00330 501 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 FOXN3O00409 490 aaPredicted RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 CES2O00748 559 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 TSPAN1O60635 241 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 BAIAP3O94812 1187 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 CD4P01730 458 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 NAGAP17050 411 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 CKMT2P17540 419 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 CHRNA3P32297 505 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 LONP1P36776 959 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 SERPINB5P36952 375 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 QARSP47897 775 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 ALDH3B2P48448 385 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 NT5C2P49902 561 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ZNF132P52740 706 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 GNA13Q14344 377 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 OXA1LQ15070 435 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 NDUFA5Q16718 116 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PKDCCQ504Y2 493 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 Q5BKY6 102 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 SPDYCQ5MJ68 293 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 FAM219BQ5XKK7 198 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 RHBDF2Q6PJF5 856 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 SGMS1Q86VZ5 419 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 FAM47BQ8NA70 645 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 BPIFB6Q8NFQ5 453 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 OR2T34Q8NGX1 318 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 RAET1EQ8TD07 263 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 EPS8L1Q8TE68 723 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 SDR42E1Q8WUS8 393 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PGBD4Q96DM1 585 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 LRGUKQ96M69 825 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 TTYH2Q9BSA4 534 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 MTG1Q9BT17 334 aaPredicted RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 ZSCAN5AQ9BUG6 496 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 OSBPL11Q9BXB4 747 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 IDI2Q9BXS1 227 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 CCSER2Q9H7U1 834 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 COQ10BQ9H8M1 238 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PRM3Q9NNZ6 103 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 GPR108Q9NPR9 543 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 OLAHQ9NV23 265 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 TMLHEQ9NVH6 421 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 CRNNQ9UBG3 495 aaPredicted RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 STK39Q9UEW8 545 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 SLCO3A1Q9UIG8 710 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 AP4E1Q9UPM8 1137 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 MAN2B2Q9Y2E5 1009 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 A0A0G2JMP0 313 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ESYT2A0FGR8 921 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ARHGEF37A1IGU5 675 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 AP3D1O14617 1153 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 HAT1O14929 419 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 CLIC2O15247 247 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ZW10O43264 779 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 SSX4O60224 188 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 NADKO95544 446 aaPredicted RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 PCP11498 1178 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 ALAS1P13196 640 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PTPN2P17706 415 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 XRCC1P18887 633 aaPredicted RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 NDUFV2P19404 249 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 CTNNA2P26232 953 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 EVI2BP34910 448 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 SOX11P35716 441 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 POLR2IP36954 125 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 CASP4P49662 377 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 NRLP54845 237 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 DLG4P78352 724 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ECT2LQ008S8 904 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 MS4A2Q01362 244 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ALDH6A1Q02252 535 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 LRRC63Q05C16 580 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PPATQ06203 517 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PIGFQ07326 219 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 RAB39AQ14964 217 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ACAP2Q15057 778 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 LETM2Q2VYF4 491 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 SGO2Q562F6 1265 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 IFIT1BQ5T764 474 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 IZUMO3Q5VZ72 239 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 KRT80Q6KB66 452 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 MFSD6Q6ZSS7 791 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 FRMD7Q6ZUT3 714 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 EEPD1Q7L9B9 569 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ADGRG6Q86SQ4 1221 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 LRRC49Q8IUZ0 686 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PASD1Q8IV76 773 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PHTF2Q8N3S3 785 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 FIBCD1Q8N539 461 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 C2orf69Q8N8R5 385 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ATP6V0D2Q8N8Y2 350 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 CATSPER1Q8NEC5 780 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 OR5H6Q8NGV6 325 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 OLIG1Q8TAK6 271 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ADAMTS16Q8TE57 1224 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ZFP90Q8TF47 636 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 KBTBD7Q8WVZ9 684 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms