RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PLEKHH3Q7Z736 793 aa14.36□□□□□ -0.11
LIG1-203ENST00000536218 ZNF276Q8N554 614 aa14.36□□□□□ -0.11
LIG1-203ENST00000536218 C2orf69Q8N8R5 385 aa14.36□□□□□ -0.11
LIG1-203ENST00000536218 BBOF1Q8ND07 529 aa14.36□□□□□ -0.11
LIG1-203ENST00000536218 UBA3Q8TBC4 463 aa14.36□□□□□ -0.11
LIG1-203ENST00000536218 HEXIM2Q96MH2 286 aaKnown RBP14.36□□□□□ -0.11
LIG1-203ENST00000536218 HESX1Q9UBX0 185 aa14.36□□□□□ -0.11
LIG1-203ENST00000536218 IP6K2Q9UHH9 426 aa14.36□□□□□ -0.11
LIG1-203ENST00000536218 CYTH4Q9UIA0 394 aa14.36□□□□□ -0.11
LIG1-203ENST00000536218 TMEM191CA6NGB0 347 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 CAPN14A8MX76 684 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 K7EPI3 171 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 ZBED1O96006 694 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 KRT1P04264 644 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 CALB1P05937 261 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 MAN1A1P33908 653 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 PTPN20Q4JDL3 420 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 DCAF6Q58WW2 860 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 C3orf62Q6ZUJ4 267 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 ZCCHC9Q8N567 271 aaKnown RBP14.35□□□□□ -0.11
LIG1-203ENST00000536218 PYROXD1Q8WU10 500 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 SLCO2A1Q92959 643 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 HPDLQ96IR7 371 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 KATNBL1Q9H079 304 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 CDHR5Q9HBB8 845 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 I3L4J1 428 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 IL18RAPO95256 599 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 MMP3P08254 477 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 CDH3P22223 829 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 RFC1P35251 1148 aaPredicted RBP14.35□□□□□ -0.11
LIG1-203ENST00000536218 YWHAGP61981 247 aaKnown RBP eCLIP14.35□□□□□ -0.11
LIG1-203ENST00000536218 PSMC1P62191 440 aaKnown RBP14.35□□□□□ -0.11
LIG1-203ENST00000536218 ZNF252P-AS1Q0IIN9 211 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 TMEM132DQ14C87 1099 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 ZNF423Q2M1K9 1284 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 GLRA4Q5JXX5 417 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 KIF12Q96FN5 646 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 TPK1Q9H3S4 243 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 SPO11Q9Y5K1 396 aa14.35□□□□□ -0.11
LIG1-203ENST00000536218 CEP350Q5VT06 3117 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 MT-ND3P03897 115 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 PROCP04070 461 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 SSTR1P30872 391 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 DYNLT1P63172 113 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 TNFAIP2Q03169 654 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 PRKD1Q15139 912 aaPredicted RBP14.34□□□□□ -0.11
LIG1-203ENST00000536218 DUSP28Q4G0W2 176 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 MARCH8Q5T0T0 291 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 MFSD7Q6UXD7 560 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 ILDR2Q71H61 639 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 TDRPQ86YL5 185 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 HPS6Q86YV9 775 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 DDHD1Q8NEL9 900 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 JOSD2Q8TAC2 188 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 NEURL2Q9BR09 285 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 ADPGKQ9BRR6 497 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 MECRQ9BV79 373 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 KIAA1522Q9P206 1035 aaPredicted RBP14.34□□□□□ -0.11
LIG1-203ENST00000536218 TSPAN1O60635 241 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 MCF2P10911 925 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 ETS1P14921 441 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 STIP1P31948 543 aaKnown RBP14.34□□□□□ -0.11
LIG1-203ENST00000536218 TMPRSS15P98073 1019 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 NFX1Q12986 1120 aaKnown RBP14.34□□□□□ -0.11
LIG1-203ENST00000536218 INAQ16352 499 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 DGKDQ16760 1214 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 SPRYD7Q5W111 196 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 ELMSAN1Q6PJG2 1045 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 KYAT3Q6YP21 454 aaKnown RBP14.34□□□□□ -0.11
LIG1-203ENST00000536218 GLIS1Q8NBF1 620 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 GTF3C2Q8WUA4 911 aaPredicted RBP14.34□□□□□ -0.11
LIG1-203ENST00000536218 OSMRQ99650 979 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 ELOVL4Q9GZR5 314 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 ABHD16BQ9H3Z7 469 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 PCSK1NQ9UHG2 260 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 ZBTB11O95625 1053 aaPredicted RBP14.34□□□□□ -0.11
LIG1-203ENST00000536218 PSMA2P25787 234 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 NEK2P51955 445 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 CCDC153Q494R4 210 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 CATSPER4Q7RTX7 472 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 CPNE9Q8IYJ1 553 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 CENPSQ8N2Z9 138 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 CPXM1Q96SM3 734 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 SNTG2Q9NY99 539 aa14.34□□□□□ -0.11
LIG1-203ENST00000536218 M0QYV0 167 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 PSTPIP1O43586 416 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 KRT3P12035 628 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 ACADVLP49748 655 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 GPS1Q13098 491 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 PEX6Q13608 980 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 DCDC5Q6ZRR9 648 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 DENND5BQ6ZUT9 1274 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 RAVER1Q8IY67 606 aaKnown RBP14.33□□□□□ -0.12
LIG1-203ENST00000536218 TTC13Q8NBP0 860 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 LRGUKQ96M69 825 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 PARK7Q99497 189 aaKnown RBP14.33□□□□□ -0.12
LIG1-203ENST00000536218 WWP1Q9H0M0 922 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 DPP3Q9NY33 737 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 SAE1Q9UBE0 346 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms