RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 KIAA0907Q7Z7F0 614 aaPredicted RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 ADIPOR2Q86V24 386 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 AHI1Q8N157 1196 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 C12orf50Q8NA57 414 aaPredicted RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 HJURPQ8NCD3 748 aaPredicted RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 ANKK1Q8NFD2 765 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 WFIKKN2Q8TEU8 576 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 DDX1Q92499 740 aaKnown RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 LMLNQ96KR4 655 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 STK33Q9BYT3 514 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 MKRN2Q9H000 416 aaKnown RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 SLC6A17Q9H1V8 727 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 VPS16Q9H269 839 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 GANQ9H2C0 597 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 SYNCQ9H7C4 482 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 FAM204AQ9H8W3 233 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 GGA2Q9UJY4 613 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 CEP83Q9Y592 693 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 CKAP5Q14008 2032 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 NUP205Q92621 2012 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 THADAQ6YHU6 1953 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 IGHV1OR15-9A0A0B4J2B8 117 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 TYW5A2RUC4 315 aaKnown RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 KCNU1A8MYU2 1149 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 EPHB6O15197 1021 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 ZBTB24O43167 697 aaPredicted RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 SYNCRIPO60506 623 aaKnown RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 ZNF217O75362 1048 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 DAB1O75553 588 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 PABPC1P11940 636 aaKnown RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 ZNF18P17022 549 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 DHPSP49366 369 aaPredicted RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 SNX16P57768 344 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 SHC2P98077 582 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 CDK17Q00537 523 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 SLC6A3Q01959 620 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 NCAPHQ15003 741 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 E2F5Q15329 346 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 PTPRNQ16849 979 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 KLHL40Q2TBA0 621 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 AASDHQ4L235 1098 aaPredicted RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 EFHC1Q5JVL4 640 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 SPDYCQ5MJ68 293 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 FKBP15Q5T1M5 1219 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 OTUD1Q5VV17 481 aaPredicted RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 TAF3Q5VWG9 929 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 OR6B2Q6IFH4 312 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 KIAA1324Q6UXG2 1013 aaKnown RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 SERPINA13PQ6UXR4 307 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 CHST9Q7L1S5 443 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 ARMCX6Q7L4S7 300 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 SLC26A9Q7LBE3 791 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 NOP9Q86U38 636 aaKnown RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 ZDHHC17Q8IUH5 632 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 MFN1Q8IWA4 741 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 TMEFF1Q8IYR6 380 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 DEFB106AQ8N104 65 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 ZNF557Q8N988 423 aaPredicted RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 TMEM35BQ8NCS4 154 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 EPS8L1Q8TE68 723 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 CYB5D2Q8WUJ1 264 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 BTN2A3PQ96KV6 586 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 DDX50Q9BQ39 737 aaKnown RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 HSD3B7Q9H2F3 369 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 TMEM245Q9H330 911 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 CD93Q9NPY3 652 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 FAM207AQ9NSI2 230 aaPredicted RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 DDIT4Q9NX09 232 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 TMEM63CQ9P1W3 806 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 STIM2Q9P246 746 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 NOCTQ9UK39 431 aaKnown RBP9.16□□□□□ -0.94
CHD4-204ENST00000535810 CYP8B1Q9UNU6 501 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 SIK3Q9Y2K2 1263 aa9.16□□□□□ -0.94
CHD4-204ENST00000535810 SYNJ2BP-COX16A0A087WUM0 186 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 LNP1A1A4G5 178 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 FAM170AA1A519 330 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 LGALS16A8MUM7 142 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 AP5Z1O43299 807 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 LUC7L3O95232 432 aaKnown RBP9.15□□□□□ -0.94
CHD4-204ENST00000535810 LSM8O95777 96 aaKnown RBP9.15□□□□□ -0.94
CHD4-204ENST00000535810 EPHX1P07099 455 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 TPM2P07951 284 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 DLDP09622 509 aaKnown RBP9.15□□□□□ -0.94
CHD4-204ENST00000535810 SLC2A3P11169 496 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 HLA-EP13747 358 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 TACR2P21452 398 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 CCR1P32246 355 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 COPB1P53618 953 aaKnown RBP9.15□□□□□ -0.94
CHD4-204ENST00000535810 COPAP53621 1224 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 LIMK1P53667 647 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 JAM2P57087 298 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 POLR2FP61218 127 aaKnown RBP9.15□□□□□ -0.94
CHD4-204ENST00000535810 RPL6Q02878 288 aaKnown RBP9.15□□□□□ -0.94
CHD4-204ENST00000535810 ARID5AQ03989 594 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 TYRO3Q06418 890 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 LMAN2Q12907 356 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 CDH18Q13634 790 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 SYCP1Q15431 976 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 LYSMD4Q5XG99 296 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms