RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 GRIA2P42262 883 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 DGKGP49619 791 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 NRG1Q02297 640 aaPredicted RBP12.45□□□□□ -0.42
CHD4-203ENST00000535717 EFHC2Q5JST6 749 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 TTC39BQ5VTQ0 682 aaPredicted RBP12.45□□□□□ -0.42
CHD4-203ENST00000535717 LRRC31Q6UY01 552 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 PYROXD2Q8N2H3 581 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 CARNMT1Q8N4J0 409 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 TMEM105Q8N8V8 129 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 CCDC112Q8NEF3 446 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 WFDC5Q8TCV5 224 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 ANP32BQ92688 251 aaKnown RBP12.45□□□□□ -0.42
CHD4-203ENST00000535717 CLDN23Q96B33 292 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 PDLIM2Q96JY6 352 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 NCAPGQ9BPX3 1015 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 GPATCH2LQ9NWQ4 482 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 DLGAP2Q9P1A6 1054 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 OR12D3Q9UGF7 316 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 USP18Q9UMW8 372 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 SLC27A6Q9Y2P4 619 aa12.45□□□□□ -0.42
CHD4-203ENST00000535717 TBC1D3BA6NDS4 549 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 ANTXRLA6NF34 631 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 TMEM110-MUSTN1A8MSY1 372 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 NCAM2O15394 837 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 PRPSAP2O60256 369 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 CNTN5O94779 1100 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 LUC7L3O95232 432 aaKnown RBP12.44□□□□□ -0.42
CHD4-203ENST00000535717 IL1R2P27930 398 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 HLA-FP30511 346 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 TNFRSF4P43489 277 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 VAV2P52735 878 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 AIF1P55008 147 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 HADHBP55084 474 aaKnown RBP12.44□□□□□ -0.42
CHD4-203ENST00000535717 KRT83P78385 493 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 CCZ1BP86790 482 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 CCZ1P86791 482 aaPredicted RBP12.44□□□□□ -0.42
CHD4-203ENST00000535717 LRRC32Q14392 662 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 MESDQ14696 234 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 CA9Q16790 459 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 GEN1Q17RS7 908 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 PREPLQ4J6C6 727 aaPredicted RBP12.44□□□□□ -0.42
CHD4-203ENST00000535717 ALFQ53S48 1182 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 FSCBQ5H9T9 825 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 DGKKQ5KSL6 1271 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 ERMARDQ5T6L9 678 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 MANEALQ5VSG8 457 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 TXNRD3NBQ6F5E7 133 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 MFN1Q8IWA4 741 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 CCAR2Q8N163 923 aaKnown RBP12.44□□□□□ -0.42
CHD4-203ENST00000535717 TERB1Q8NA31 727 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 FIBINQ8TAL6 211 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 LMLNQ96KR4 655 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 LRFN3Q9BTN0 628 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 SNRNP25Q9BV90 132 aaKnown RBP12.44□□□□□ -0.42
CHD4-203ENST00000535717 LACRTQ9GZZ8 138 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 ABCB8Q9NUT2 735 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 MPP6Q9NZW5 540 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 LCMT1Q9UIC8 334 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 SALL4Q9UJQ4 1053 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 AP4E1Q9UPM8 1137 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 NEU3Q9UQ49 428 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 DUSP10Q9Y6W6 482 aa12.44□□□□□ -0.42
CHD4-203ENST00000535717 A0A0A6YYK5 440 aaPredicted RBP12.43□□□□□ -0.42
CHD4-203ENST00000535717 A0A0U1RQJ8 604 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 A0A1B0GVM2 712 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 TCAF2A6NFQ2 919 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 PRRT4C9JH25 899 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 H0Y626 953 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 PJA2O43164 708 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 ARHGAP6O43182 974 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 LRIG2O94898 1065 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 CHRM1P11229 460 aaPredicted RBP12.43□□□□□ -0.42
CHD4-203ENST00000535717 AVPR2P30518 371 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 L1CAMP32004 1257 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 CD70P32970 193 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 MAN1A1P33908 653 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 ARHGAP25P42331 645 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 NOP2P46087 812 aaKnown RBP12.43□□□□□ -0.42
CHD4-203ENST00000535717 RPS9P46781 194 aaKnown RBP12.43□□□□□ -0.42
CHD4-203ENST00000535717 SEC13P55735 322 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 SLC25A11Q02978 314 aaKnown RBP12.43□□□□□ -0.42
CHD4-203ENST00000535717 SEMA3BQ13214 749 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 CDH18Q13634 790 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 Q6ZS52 159 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 CHST9Q7L1S5 443 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 ANKS1BQ7Z6G8 1248 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 KIAA0907Q7Z7F0 614 aaPredicted RBP12.43□□□□□ -0.42
CHD4-203ENST00000535717 KIAA1328Q86T90 577 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 PSTKQ8IV42 348 aaKnown RBP12.43□□□□□ -0.42
CHD4-203ENST00000535717 SYNPOQ8N3V7 929 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.43□□□□□ -0.42
CHD4-203ENST00000535717 ATRIPQ8WXE1 791 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 DHX35Q9H5Z1 703 aaKnown RBP12.43□□□□□ -0.42
CHD4-203ENST00000535717 ZWILCHQ9H900 591 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 PPARGC1AQ9UBK2 798 aaKnown RBP12.43□□□□□ -0.42
CHD4-203ENST00000535717 GGA2Q9UJY4 613 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 HCN2Q9UL51 889 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 ADGRG1Q9Y653 693 aa12.43□□□□□ -0.42
CHD4-203ENST00000535717 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.42□□□□□ -0.42
CHD4-203ENST00000535717 BTNL10A8MVZ5 291 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms