RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 EPG5Q9HCE0 2579 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 GOLGA8CPA6NN73 597 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 MAGEC1O60732 1142 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 ADH1BP00325 375 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 IGLV3-27P01718 113 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 PRKCSHP14314 528 aaPredicted RBP13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 ZNF18P17022 549 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 CCR1P32246 355 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 CD70P32970 193 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 ACSL1P33121 698 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 KRT9P35527 623 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 MTIF2P46199 727 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 CSNK1EP49674 416 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 RPS14P62263 151 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 ECT2LQ008S8 904 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 PTK2Q05397 1052 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 HNRNPA1L2Q32P51 320 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 PKDCCQ504Y2 493 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 MS4A13Q5J8X5 152 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 EFHC1Q5JVL4 640 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 FAM46CQ5VWP2 391 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 TMEM215Q68D42 235 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 KIAA0895LQ68EN5 471 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 TTI2Q6NXR4 508 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 GBP6Q6ZN66 633 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 BEND5Q7L4P6 421 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 DHX40Q8IX18 779 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 LGI2Q8N0V4 545 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 UBR7Q8N806 425 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 MSANTD4Q8NCY6 345 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 IGSF8Q969P0 613 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 PABPC3Q9H361 631 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 C6orf106Q9H6K1 298 aaPredicted RBP13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 OSGEPQ9NPF4 335 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 TMEM51Q9NW97 253 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 DACH1Q9UI36 760 aa13.71□□□□□ -0.21
CLSTN3-205ENST00000535452 CEP192Q8TEP8 1941 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 SYNJ2BP-COX16A0A087WUM0 186 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 GOLGA6L7A0A1B0GV03 622 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 YKT6O15498 198 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 ARRB1P49407 418 aaPredicted RBP13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 RACK1P63244 317 aaKnown RBP13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 CST6Q15828 149 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 ARHGAP44Q17R89 818 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 ACCSLQ4AC99 568 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 CCDC157Q569K6 752 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 DCAF6Q58WW2 860 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 PITRM1Q5JRX3 1037 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 RAP1GAP2Q684P5 730 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 BHLHA9Q7RTU4 235 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 TRIM59Q8IWR1 403 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 ADAM32Q8TC27 787 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 GATA6Q92908 595 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 BIRC7Q96CA5 298 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 CAMK1GQ96NX5 476 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 RSPH9Q9H1X1 276 aaPredicted RBP13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 CCDC86Q9H6F5 360 aaKnown RBP13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 TM9SF3Q9HD45 589 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 COX16Q9P0S2 106 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 FTSJ1Q9UET6 329 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 PCOLCE2Q9UKZ9 415 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 FZD4Q9ULV1 537 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 ERVW-1Q9UQF0 538 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 NAALADL1Q9UQQ1 740 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 ANKRD6Q9Y2G4 727 aa13.7□□□□□ -0.22
CLSTN3-205ENST00000535452 TNRC6BQ9UPQ9 1833 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 C1QTNF3-AMACRE9PGA6 284 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 PES1O00541 588 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 HSF2BPO75031 334 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 TRUB2O95900 331 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 TOP3BO95985 862 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 IL1BP01584 269 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 TPM2P07951 284 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 GLI1P08151 1106 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 CDK4P11802 303 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 TACR2P21452 398 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 C5AR1P21730 350 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 SLC6A4P31645 630 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 GPD2P43304 727 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 PSMD8P48556 350 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 BPIFB4P59827 614 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 RPS24P62847 133 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 ZNF177Q13360 481 aaPredicted RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 MORC3Q14149 939 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 ELAVL3Q14576 367 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 PTPRNQ16849 979 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 EXOC3L4Q17RC7 722 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 KIF19Q2TAC6 998 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 FAM133BQ5BKY9 247 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 RAB44Q7Z6P3 723 aaPredicted RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 KIAA0907Q7Z7F0 614 aaPredicted RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 GLRX5Q86SX6 157 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 PRPF39Q86UA1 669 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 TAC4Q86UU9 113 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 MMAAQ8IVH4 418 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 ARHGEF19Q8IW93 802 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 CFAP52Q8N1V2 620 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 OXR1Q8N573 874 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms