RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 RARGP13631 454 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 GOT1P17174 413 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 WT1P19544 449 aaPredicted RBP11.17□□□□□ -0.62
VAMP1-204ENST00000535180 CORO1AP31146 461 aaKnown RBP11.17□□□□□ -0.62
VAMP1-204ENST00000535180 SLC8A1P32418 973 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 PDX1P52945 283 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 COG7P83436 770 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 KCNMA1Q12791 1236 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 GNL2Q13823 731 aaKnown RBP11.17□□□□□ -0.62
VAMP1-204ENST00000535180 CDKN3Q16667 212 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 VASH2Q86V25 355 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 JAMLQ86YT9 394 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 SRRM1Q8IYB3 904 aaKnown RBP11.17□□□□□ -0.62
VAMP1-204ENST00000535180 AHI1Q8N157 1196 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 ZNF276Q8N554 614 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.17□□□□□ -0.62
VAMP1-204ENST00000535180 MED10Q9BTT4 135 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 FOXP1Q9H334 677 aaPredicted RBP11.17□□□□□ -0.62
VAMP1-204ENST00000535180 NMUR1Q9HB89 426 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 NCKIPSDQ9NZQ3 722 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 SCML2Q9UQR0 700 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 NAV3Q8IVL0 2385 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 PDZD2O15018 2839 aa11.17□□□□□ -0.62
VAMP1-204ENST00000535180 A1L4Q6 167 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 CPED1A4D0V7 1026 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 EME2A4GXA9 379 aaPredicted RBP11.16□□□□□ -0.62
VAMP1-204ENST00000535180 NVLO15381 856 aaKnown RBP11.16□□□□□ -0.62
VAMP1-204ENST00000535180 MTSS1O43312 755 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 SIN3BO75182 1162 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 RTN2O75298 545 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 AP1G2O75843 785 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 BEST1O76090 585 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 TNNC2P02585 160 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 COL8A1P27658 744 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 HOXD9P28356 352 aaPredicted RBP11.16□□□□□ -0.62
VAMP1-204ENST00000535180 UGT1A5P35504 534 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 PRPHP41219 470 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 EIF3IQ13347 325 aaKnown RBP11.16□□□□□ -0.62
VAMP1-204ENST00000535180 MBLAC2Q68D91 279 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 ZCCHC8Q6NZY4 707 aaKnown RBP11.16□□□□□ -0.62
VAMP1-204ENST00000535180 DTHD1Q6ZMT9 781 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 EFL1Q7Z2Z2 1120 aaKnown RBP11.16□□□□□ -0.62
VAMP1-204ENST00000535180 TADA2BQ86TJ2 420 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 GPBP1Q86WP2 473 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 DENND1CQ8IV53 801 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 MMAAQ8IVH4 418 aaKnown RBP11.16□□□□□ -0.62
VAMP1-204ENST00000535180 FAM217AQ8IXS0 508 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 FBXO39Q8N4B4 442 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 AADATQ8N5Z0 425 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 OR5B17Q8NGF7 314 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 WDR48Q8TAF3 677 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 MYO19Q96H55 970 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 SMOQ99835 787 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 ZHX3Q9H4I2 956 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 KRT82Q9NSB4 513 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 ABCB8Q9NUT2 735 aa11.16□□□□□ -0.62
VAMP1-204ENST00000535180 APCP25054 2843 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 A0A1W2PQH9 124 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 SLC12A8A0AV02 714 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 PRAMEF26H0Y7S4 382 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 PABPC1P11940 636 aaKnown RBP11.15□□□□□ -0.62
VAMP1-204ENST00000535180 MAT2AP31153 395 aaKnown RBP11.15□□□□□ -0.62
VAMP1-204ENST00000535180 GUCY1B3Q02153 619 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 DUOXA2Q1HG44 320 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 HNRNPA1L2Q32P51 320 aaKnown RBP11.15□□□□□ -0.62
VAMP1-204ENST00000535180 TMEM119Q4V9L6 283 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 MPPE1Q53F39 396 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 GUSBP11Q6P575 273 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 CRTC1Q6UUV9 634 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 RAB11FIP2Q7L804 512 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 ZNF720Q7Z2F6 126 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 FUKQ8N0W3 1084 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 HVCN1Q96D96 273 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 CDK5RAP3Q96JB5 506 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 SLC12A9Q9BXP2 914 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 CAAP1Q9H8G2 361 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 CSNK1G1Q9HCP0 422 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 ZNF71Q9NQZ8 489 aaPredicted RBP11.15□□□□□ -0.62
VAMP1-204ENST00000535180 CUEDC1Q9NWM3 386 aaPredicted RBP11.15□□□□□ -0.62
VAMP1-204ENST00000535180 SEL1LQ9UBV2 794 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 CYTH4Q9UIA0 394 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 GGA2Q9UJY4 613 aa11.15□□□□□ -0.62
VAMP1-204ENST00000535180 NOL7Q9UMY1 257 aaKnown RBP11.15□□□□□ -0.62
VAMP1-204ENST00000535180 TRPM6Q9BX84 2022 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 FBN3Q75N90 2809 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 HIVEP1P15822 2718 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 GOLGA8IPA6NC78 632 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 VWA3AA6NCI4 1184 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 GOLGA8JA6NMD2 632 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 RNGTTO60942 597 aaKnown RBP11.14□□□□□ -0.63
VAMP1-204ENST00000535180 TBCAO75347 108 aaKnown RBP11.14□□□□□ -0.63
VAMP1-204ENST00000535180 PPP1R37O75864 691 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 NEBLO76041 1014 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 PRPF6O94906 941 aaKnown RBP11.14□□□□□ -0.63
VAMP1-204ENST00000535180 KRT18P05783 430 aaKnown RBP11.14□□□□□ -0.63
VAMP1-204ENST00000535180 HMBSP08397 361 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 RNF224P0DH78 156 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 POLR2EP19388 210 aaKnown RBP11.14□□□□□ -0.63
VAMP1-204ENST00000535180 C5AR1P21730 350 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 GARTP22102 1010 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms