RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 TBC1D30Q9Y2I9 924 aa4.64□□□□□ -1.67
ITGB1-219ENST00000534049 LRRFIP2Q9Y608 721 aaKnown RBP4.64□□□□□ -1.67
ITGB1-219ENST00000534049 CDK12Q9NYV4 1490 aaPredicted RBP4.63□□□□□ -1.67
ITGB1-219ENST00000534049 KIF1BO60333 1816 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 ADGRB1O14514 1584 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 ADGRB2O60241 1585 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 GOLGA6L9A6NEM1 432 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 TMEM232C9JQI7 657 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 AP4M1O00189 453 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 FOXN3O00409 490 aaPredicted RBP4.63□□□□□ -1.67
ITGB1-219ENST00000534049 CES2O00748 559 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 CD3EAPO15446 510 aaKnown RBP4.63□□□□□ -1.67
ITGB1-219ENST00000534049 CEP104O60308 925 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 SRGAP2O75044 1071 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 PMPCBO75439 489 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 GCATO75600 419 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 RASSF9O75901 435 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 RASAL1O95294 804 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 ZBED1O96006 694 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 ERBB2P04626 1255 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 NHLRC4P0CG21 123 aaPredicted RBP4.63□□□□□ -1.67
ITGB1-219ENST00000534049 ATICP31939 592 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 MMP13P45452 471 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 TIAL1Q01085 375 aaKnown RBP eCLIP4.63□□□□□ -1.67
ITGB1-219ENST00000534049 SLMAPQ14BN4 828 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 FAM187BQ17R55 369 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 CCDC38Q502W7 563 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 CEP78Q5JTW2 689 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 CACHD1Q5VU97 1274 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 FCRL6Q6DN72 434 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 C11orf87Q6NUJ2 197 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 SYNE3Q6ZMZ3 975 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 ZNF813Q6ZN06 617 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 SPATA21Q7Z572 469 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 UBE2Q1Q7Z7E8 422 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 MFN1Q8IWA4 741 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 CCDC65Q8IXS2 484 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 CCDC170Q8IYT3 715 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 OR56A3Q8NH54 315 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 CTCFLQ8NI51 663 aaPredicted RBP4.63□□□□□ -1.67
ITGB1-219ENST00000534049 DNAJB14Q8TBM8 379 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 BICD2Q8TD16 824 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 GPT2Q8TD30 523 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 TMEM171Q8WVE6 324 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 MAML1Q92585 1016 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 CCDC47Q96A33 483 aaKnown RBP4.63□□□□□ -1.67
ITGB1-219ENST00000534049 APIPQ96GX9 242 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 CCDC17Q96LX7 622 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 C5orf34Q96MH7 638 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 MACROD1Q9BQ69 325 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 TMEM79Q9BSE2 394 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 ZSCAN16Q9H4T2 348 aaPredicted RBP4.63□□□□□ -1.67
ITGB1-219ENST00000534049 RABEP2Q9H5N1 569 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 SACM1LQ9NTJ5 587 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 SPATA7Q9P0W8 599 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 NOB1Q9ULX3 412 aaKnown RBP4.63□□□□□ -1.67
ITGB1-219ENST00000534049 WDR17Q8IZU2 1322 aa4.63□□□□□ -1.67
ITGB1-219ENST00000534049 EIF3CLB5ME19 914 aaKnown RBP4.62□□□□□ -1.67
ITGB1-219ENST00000534049 CHUKO15111 745 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 AHCYL1O43865 530 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 RTN3O95197 1032 aaPredicted RBP4.62□□□□□ -1.67
ITGB1-219ENST00000534049 PDE8BO95263 885 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 ZNF24P17028 368 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 XBP1P17861 261 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 ACVR2AP27037 513 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 MPGP29372 298 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 UQCRC1P31930 480 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 TIRAPP58753 221 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 SLC29A2Q14542 456 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 TRIP6Q15654 476 aaKnown RBP4.62□□□□□ -1.67
ITGB1-219ENST00000534049 ST3GAL2Q16842 350 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 LY6KQ17RY6 165 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 GFOD2Q3B7J2 385 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 PARP10Q53GL7 1025 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 CCDC92Q53HC0 331 aaPredicted RBP4.62□□□□□ -1.67
ITGB1-219ENST00000534049 PXDC1Q5TGL8 231 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 RNF220Q5VTB9 566 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 SWSAP1Q6NVH7 229 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 CHST15Q7LFX5 561 aaPredicted RBP4.62□□□□□ -1.67
ITGB1-219ENST00000534049 TADA2BQ86TJ2 420 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 CCDC50Q8IVM0 306 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 HSCBQ8IWL3 235 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 RNF168Q8IYW5 571 aaPredicted RBP4.62□□□□□ -1.67
ITGB1-219ENST00000534049 CCDC112Q8NEF3 446 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 EXOC6Q8TAG9 804 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 ERMNQ8TAM6 284 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 RSPH1Q8WYR4 309 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 PPP1R14BQ96C90 147 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 EVI5LQ96CN4 794 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 ERO1AQ96HE7 468 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 DHTKD1Q96HY7 919 aaPredicted RBP4.62□□□□□ -1.67
ITGB1-219ENST00000534049 MSLNLQ96KJ4 702 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 FAM81BQ96LP2 452 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 FCRL4Q96PJ5 515 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 MMS19Q96T76 1030 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 EIF3CQ99613 913 aaKnown RBP4.62□□□□□ -1.67
ITGB1-219ENST00000534049 ZNF287Q9HBT7 754 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 PRDM11Q9NQV5 511 aa4.62□□□□□ -1.67
ITGB1-219ENST00000534049 GAR1Q9NY12 217 aaKnown RBP4.62□□□□□ -1.67
ITGB1-219ENST00000534049 RGL1Q9NZL6 768 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms