RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 KDM1BQ8NB78 822 aa18.04■□□□□ 0.48
VPS51-213ENST00000533827 SLC2A13Q96QE2 648 aa18.04■□□□□ 0.48
VPS51-213ENST00000533827 CPXM1Q96SM3 734 aa18.04■□□□□ 0.48
VPS51-213ENST00000533827 MTG2Q9H4K7 406 aa18.04■□□□□ 0.48
VPS51-213ENST00000533827 C6orf106Q9H6K1 298 aaPredicted RBP18.04■□□□□ 0.48
VPS51-213ENST00000533827 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.04■□□□□ 0.48
VPS51-213ENST00000533827 EIF2B4Q9UI10 523 aaKnown RBP18.04■□□□□ 0.48
VPS51-213ENST00000533827 AJAP1Q9UKB5 411 aaPredicted RBP18.04■□□□□ 0.48
VPS51-213ENST00000533827 MAP1BP46821 2468 aaKnown RBP18.03■□□□□ 0.48
VPS51-213ENST00000533827 DNTTP04053 509 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 TACR2P21452 398 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 ST8SIA6P61647 398 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 FAM193AP78312 1265 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 BNC1Q01954 994 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 ARID5BQ14865 1188 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 MAN2A1Q16706 1144 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 PITRM1Q5JRX3 1037 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 CCDC117Q8IWD4 279 aaPredicted RBP18.03■□□□□ 0.48
VPS51-213ENST00000533827 DEFB106AQ8N104 65 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 PPP1R13BQ96KQ4 1090 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 PRMT1Q99873 361 aaKnown RBP18.03■□□□□ 0.48
VPS51-213ENST00000533827 TMEM121BQ9BXQ6 578 aaPredicted RBP18.03■□□□□ 0.48
VPS51-213ENST00000533827 BTBD1Q9H0C5 482 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 RSPH9Q9H1X1 276 aaPredicted RBP18.03■□□□□ 0.48
VPS51-213ENST00000533827 CLSTN2Q9H4D0 955 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 ASNSD1Q9NWL6 643 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 KIAA1522Q9P206 1035 aaPredicted RBP18.03■□□□□ 0.48
VPS51-213ENST00000533827 DNAJC12Q9UKB3 198 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 ERVW-1Q9UQF0 538 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 ASPMQ8IZT6 3477 aa18.03■□□□□ 0.48
VPS51-213ENST00000533827 ZFHX4Q86UP3 3567 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 KCNU1A8MYU2 1149 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 FOXN3O00409 490 aaPredicted RBP18.02■□□□□ 0.48
VPS51-213ENST00000533827 SH3BP5O60239 455 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 SIN3BO75182 1162 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 PROS1P07225 676 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 SRPRAP08240 638 aaKnown RBP18.02■□□□□ 0.48
VPS51-213ENST00000533827 CLCN1P35523 988 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 SIM1P81133 766 aaPredicted RBP18.02■□□□□ 0.48
VPS51-213ENST00000533827 PTK2Q05397 1052 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 HNRNPDQ14103 355 aaKnown RBP18.02■□□□□ 0.48
VPS51-213ENST00000533827 CACNA1EQ15878 2313 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 TPD52L1Q16890 204 aaPredicted RBP18.02■□□□□ 0.48
VPS51-213ENST00000533827 HNRNPA1L2Q32P51 320 aaKnown RBP18.02■□□□□ 0.48
VPS51-213ENST00000533827 EFHC1Q5JVL4 640 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 ZNF776Q68DI1 518 aaPredicted RBP18.02■□□□□ 0.48
VPS51-213ENST00000533827 DPY19L2P1Q6NXN4 242 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 CHSY1Q86X52 802 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 PASD1Q8IV76 773 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 ATP6V0D2Q8N8Y2 350 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 SCNM1Q9BWG6 230 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 ADAM33Q9BZ11 813 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 SCML1Q9UN30 329 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.02■□□□□ 0.48
VPS51-213ENST00000533827 SLCO1B1Q9Y6L6 691 aa18.02■□□□□ 0.48
VPS51-213ENST00000533827 ITIH6Q6UXX5 1313 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 PCNX2A6NKB5 2137 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 C1QTNF9BB2RNN3 333 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 F5H5T6 163 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 H0Y626 953 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 HSF2BPO75031 334 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 MOCS3O95396 460 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 SEMA4FO95754 770 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 C1QTNF9P0C862 333 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 CTSOP43234 321 aaPredicted RBP18.01■□□□□ 0.47
VPS51-213ENST00000533827 CDK17Q00537 523 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 DPCR1Q3MIW9 517 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 TTC31Q49AM3 519 aaPredicted RBP18.01■□□□□ 0.47
VPS51-213ENST00000533827 MIIPQ5JXC2 388 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 C9orf64Q5T6V5 341 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 UNQ6494/PRO21346Q6UXR6 183 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 FAM183BPQ6ZVS7 135 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 SLC47A2Q86VL8 602 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 FAM114A1Q8IWE2 563 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 APCDD1Q8J025 514 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 C1orf131Q8NDD1 294 aaKnown RBP18.01■□□□□ 0.47
VPS51-213ENST00000533827 CAMK1GQ96NX5 476 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 FAM204AQ9H8W3 233 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 SGK2Q9HBY8 427 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 OSGEPQ9NPF4 335 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 SLC12A6Q9UHW9 1150 aa18.01■□□□□ 0.47
VPS51-213ENST00000533827 USP24Q9UPU5 2620 aa18■□□□□ 0.47
VPS51-213ENST00000533827 TARSL2A2RTX5 802 aaKnown RBP18■□□□□ 0.47
VPS51-213ENST00000533827 ERBB2P04626 1255 aa18■□□□□ 0.47
VPS51-213ENST00000533827 PNMA6AP0CW24 399 aaPredicted RBP18■□□□□ 0.47
VPS51-213ENST00000533827 SLC2A3P11169 496 aa18■□□□□ 0.47
VPS51-213ENST00000533827 ERCC5P28715 1186 aaPredicted RBP18■□□□□ 0.47
VPS51-213ENST00000533827 CCR1P32246 355 aa18■□□□□ 0.47
VPS51-213ENST00000533827 ECT2LQ008S8 904 aa18■□□□□ 0.47
VPS51-213ENST00000533827 VWA3BQ502W6 1294 aa18■□□□□ 0.47
VPS51-213ENST00000533827 IL27RAQ6UWB1 636 aa18■□□□□ 0.47
VPS51-213ENST00000533827 OLFML1Q6UWY5 402 aa18■□□□□ 0.47
VPS51-213ENST00000533827 C11orf57Q6ZUT1 292 aaPredicted RBP18■□□□□ 0.47
VPS51-213ENST00000533827 USP30Q70CQ3 517 aa18■□□□□ 0.47
VPS51-213ENST00000533827 NAXDQ8IW45 347 aa18■□□□□ 0.47
VPS51-213ENST00000533827 DHX40Q8IX18 779 aaKnown RBP18■□□□□ 0.47
VPS51-213ENST00000533827 FAM71AQ8IYT1 594 aa18■□□□□ 0.47
VPS51-213ENST00000533827 CCAR2Q8N163 923 aaKnown RBP18■□□□□ 0.47
VPS51-213ENST00000533827 BIRC7Q96CA5 298 aa18■□□□□ 0.47
VPS51-213ENST00000533827 NOX5Q96PH1 765 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms