RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 CLSTN1O94985 981 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 KIF20AO95235 890 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 GIMD1P0DJR0 217 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 STAT6P42226 847 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 METAP1P53582 386 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 DLG4P78352 724 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 CLDN10P78369 228 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 ZNF211Q13398 564 aaPredicted RBP12.8□□□□□ -0.36
SVIP-205ENST00000533774 LINC00303Q3SY05 128 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 C9orf64Q5T6V5 341 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 BHLHA9Q7RTU4 235 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 TADA2BQ86TJ2 420 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 MMAAQ8IVH4 418 aaKnown RBP12.8□□□□□ -0.36
SVIP-205ENST00000533774 AHI1Q8N157 1196 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 FAM129BQ96TA1 746 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 ARHGAP20Q9P2F6 1191 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 INTS6Q9UL03 887 aaKnown RBP12.8□□□□□ -0.36
SVIP-205ENST00000533774 CA5BQ9Y2D0 317 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 U3KQA8 63 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 UTP20O75691 2785 aaKnown RBP12.8□□□□□ -0.36
SVIP-205ENST00000533774 LRRK2Q5S007 2527 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 SPTAN1Q13813 2472 aaKnown RBP12.79□□□□□ -0.36
SVIP-205ENST00000533774 EFSO43281 561 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 LATO43561 262 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 CD2BP2O95400 341 aaKnown RBP12.79□□□□□ -0.36
SVIP-205ENST00000533774 SLC8A1P32418 973 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 ADPRHP54922 357 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 INCA1Q0VD86 236 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 HNRNPA1L2Q32P51 320 aaKnown RBP12.79□□□□□ -0.36
SVIP-205ENST00000533774 PPP1R26Q5T8A7 1209 aaPredicted RBP12.79□□□□□ -0.36
SVIP-205ENST00000533774 RFWD3Q6PCD5 774 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 CCDC73Q6ZRK6 1079 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 STXBP4Q6ZWJ1 553 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 TMC6Q7Z403 805 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 LSMEM2Q8N112 164 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 PDILTQ8N807 584 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 MFSD2AQ8NA29 543 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 PLD4Q96BZ4 506 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 TMA16Q96EY4 203 aaKnown RBP12.79□□□□□ -0.36
SVIP-205ENST00000533774 PRR11Q96HE9 360 aaPredicted RBP12.79□□□□□ -0.36
SVIP-205ENST00000533774 CDK5RAP1Q96SZ6 601 aaKnown RBP12.79□□□□□ -0.36
SVIP-205ENST00000533774 OMDQ99983 421 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 DUSP16Q9BY84 665 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 APOBEC3GQ9HC16 384 aaKnown RBP12.79□□□□□ -0.36
SVIP-205ENST00000533774 STOML2Q9UJZ1 356 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 SCML1Q9UN30 329 aa12.79□□□□□ -0.36
SVIP-205ENST00000533774 TRPM6Q9BX84 2022 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 GOLGA6L7A0A1B0GV03 622 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 TTC34A8MYJ7 566 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 ASS1P00966 412 aaKnown RBP12.78□□□□□ -0.36
SVIP-205ENST00000533774 ATP5BP06576 529 aaKnown RBP12.78□□□□□ -0.36
SVIP-205ENST00000533774 POLR2EP19388 210 aaKnown RBP12.78□□□□□ -0.36
SVIP-205ENST00000533774 CTSOP43234 321 aaPredicted RBP12.78□□□□□ -0.36
SVIP-205ENST00000533774 PSMD8P48556 350 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 YWHAGP61981 247 aaKnown RBP eCLIP12.78□□□□□ -0.36
SVIP-205ENST00000533774 DAB2P98082 770 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 NAPEPLDQ6IQ20 393 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 FAM173BQ6P4H8 233 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 BRAPQ7Z569 592 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 C12orf56Q8IXR9 622 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 OXR1Q8N573 874 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 OR4C6Q8NH72 309 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 OR14C36Q8NHC7 312 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 TTC17Q96AE7 1141 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 MYEOVQ96EZ4 313 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 TMX3Q96JJ7 454 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 DEPDC7Q96QD5 511 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 OSBPL2Q9H1P3 480 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 SFMBT1Q9UHJ3 866 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 STRIP2Q9ULQ0 834 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 FZD4Q9ULV1 537 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 SATB2Q9UPW6 733 aa12.78□□□□□ -0.36
SVIP-205ENST00000533774 CASC3O15234 703 aaKnown RBP12.77□□□□□ -0.37
SVIP-205ENST00000533774 FFAR2O15552 330 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 MSI1O43347 362 aaKnown RBP12.77□□□□□ -0.37
SVIP-205ENST00000533774 STX6O43752 255 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 TBL1XO60907 577 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 GOT1P17174 413 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 ITGB6P18564 788 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 DGKAP23743 735 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 CASP1P29466 404 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 MAT2AP31153 395 aaKnown RBP12.77□□□□□ -0.37
SVIP-205ENST00000533774 SLC6A4P31645 630 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 DRD3P35462 400 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 CSKP41240 450 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 SGSM1Q2NKQ1 1148 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 ARL13BQ3SXY8 428 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 ZACNQ401N2 412 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 C3orf38Q5JPI3 329 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 RAB41Q5JT25 222 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 FAM26FQ5R3K3 315 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 C1orf220Q5T0J3 134 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 ADGRF1Q5T601 910 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 MMS22LQ6ZRQ5 1243 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 RSRC2Q7L4I2 434 aaKnown RBP12.77□□□□□ -0.37
SVIP-205ENST00000533774 STK40Q8N2I9 435 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 SLC46A1Q96NT5 459 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 FAM117AQ9C073 453 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 THSD1Q9NS62 852 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms