RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 GPR182O15218 404 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 CREB3O43889 395 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 PIAS1O75925 651 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 USP1O94782 785 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 CBX6O95503 412 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 ESRRAP11474 423 aaPredicted RBP12.28□□□□□ -0.44
ATM-222ENST00000533733 ERCC2P18074 760 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 DNAJB1P25685 340 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 PSMB4P28070 264 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 CSE1LP55060 971 aaKnown RBP12.28□□□□□ -0.44
ATM-222ENST00000533733 MAP3K7CLP57077 242 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 HIC1Q14526 733 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 PRPSAP1Q14558 356 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 CHI3L2Q15782 390 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 DSTYKQ6XUX3 929 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 PID1Q7Z2X4 250 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 MRPL10Q7Z7H8 261 aaKnown RBP12.28□□□□□ -0.44
ATM-222ENST00000533733 LINC00523Q86TU6 105 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 METTL23Q86XA0 190 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 MPP5Q8N3R9 675 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 SMC1BQ8NDV3 1235 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 SLC7A14Q8TBB6 771 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 ARNTL2Q8WYA1 636 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 CERS2Q96G23 380 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 UROC1Q96N76 676 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 SLC13A1Q9BZW2 595 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 CSNK1G1Q9HCP0 422 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 CRTAC1Q9NQ79 661 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 PIGVQ9NUD9 493 aa12.28□□□□□ -0.44
ATM-222ENST00000533733 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.27□□□□□ -0.45
ATM-222ENST00000533733 FAM237BA0A1B0GVD1 139 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 HMX2A2RU54 273 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 GYG2O15488 501 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 ZNF623O75123 536 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 H2AFYO75367 372 aaKnown RBP12.27□□□□□ -0.45
ATM-222ENST00000533733 MPOP05164 745 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 ITGA2BP08514 1039 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 SKIP12755 728 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 PTPN3P26045 913 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 MGAT1P26572 445 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 CXCR3P49682 368 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 INHBEP58166 350 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 GALNT2Q10471 571 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 NME3Q13232 169 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 BMPR2Q13873 1038 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 PRAMEF19Q5SWL8 479 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 DCLRE1AQ6PJP8 1040 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 TMPRSS6Q8IU80 811 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 PPP1R14CQ8TAE6 165 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 PPP4R1Q8TF05 950 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 ACBD6Q9BR61 282 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 OSBPL2Q9H1P3 480 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 GBA3Q9H227 469 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 SPC25Q9HBM1 224 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 CASS4Q9NQ75 786 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 XPNPEP3Q9NQH7 507 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 FLRT1Q9NZU1 646 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 CPA4Q9UI42 421 aa12.27□□□□□ -0.45
ATM-222ENST00000533733 SHROOM3Q8TF72 1996 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 FCHO1O14526 889 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 TIMM44O43615 452 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 PLIN3O60664 434 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 MAGEC1O60732 1142 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 LUC7L3O95232 432 aaKnown RBP12.26□□□□□ -0.45
ATM-222ENST00000533733 CELF2O95319 508 aaKnown RBP12.26□□□□□ -0.45
ATM-222ENST00000533733 CYP11A1P05108 521 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 SERPINE1P05121 402 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 SERPINA6P08185 405 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 SRGAP2BP0DMP2 458 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 MAGEA12P43365 314 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 POLD2P49005 469 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 SERPINB8P50452 374 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 PRKAA2P54646 552 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 SESN2P58004 480 aaPredicted RBP12.26□□□□□ -0.45
ATM-222ENST00000533733 NKX3-2P78367 333 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 PDE1BQ01064 536 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 TAF1CQ15572 869 aaPredicted RBP12.26□□□□□ -0.45
ATM-222ENST00000533733 ZRSR2Q15696 482 aaKnown RBP12.26□□□□□ -0.45
ATM-222ENST00000533733 DNAL1Q4LDG9 190 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 SYPL2Q5VXT5 272 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 PM20D1Q6GTS8 502 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 TLDC1Q6P9B6 456 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 TMEM135Q86UB9 458 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 RASSF3Q86WH2 238 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 CCDC117Q8IWD4 279 aaPredicted RBP12.26□□□□□ -0.45
ATM-222ENST00000533733 KLHDC8BQ8IXV7 354 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 LZTR1Q8N653 840 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.26□□□□□ -0.45
ATM-222ENST00000533733 PIWIL2Q8TC59 973 aaKnown RBP12.26□□□□□ -0.45
ATM-222ENST00000533733 MCUR1Q96AQ8 359 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 PCED1BQ96HM7 432 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 TSGA13Q96PP4 275 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 SMOQ99835 787 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 COLEC11Q9BWP8 271 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 IL22Q9GZX6 179 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 C1orf21Q9H246 121 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 C12orf65Q9H3J6 166 aaKnown RBP12.26□□□□□ -0.45
ATM-222ENST00000533733 WDCPQ9H6R7 721 aa12.26□□□□□ -0.45
ATM-222ENST00000533733 ALG13Q9NP73 1137 aaKnown RBP12.26□□□□□ -0.45
ATM-222ENST00000533733 ST3GAL5Q9UNP4 418 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms