RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 VAPBO95292 243 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 NUDT14O95848 222 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 MPOP05164 745 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 SPATA31D3P0C874 917 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 SLC2A4P14672 509 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 PAX3P23760 479 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 MIPP30301 263 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 GP5P40197 560 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 CLK1P49759 484 aaKnown RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 SLC12A3P55017 1021 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 ITGA7Q13683 1181 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 TOMM20Q15388 145 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 LRRC23Q53EV4 343 aaPredicted RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 RAP1GAP2Q684P5 730 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 ZNF470Q6ECI4 717 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 SPATA31D4Q6ZUB0 917 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 REXO1L1PQ8IX06 675 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 FBXO39Q8N4B4 442 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 SPATA20Q8TB22 786 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 TBL1YQ9BQ87 522 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 ARMC7Q9H6L4 198 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 CDH9Q9ULB4 789 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 DEAF1O75398 565 aaPredicted RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 IL1BP01584 269 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 NPR3P17342 541 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 TM4SF1P30408 202 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 CYP2C18P33260 490 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 PSEN1P49768 467 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 NEK2P51955 445 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 SEC24CP53992 1094 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 CYLC2Q14093 348 aaPredicted RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 IYDQ6PHW0 289 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 WDR59Q6PJI9 974 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 KCNT2Q6UVM3 1135 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 IFNLR1Q8IU57 520 aaPredicted RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 DENND1CQ8IV53 801 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 CHPFQ8IZ52 775 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 YIPF3Q9GZM5 350 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 TMEM245Q9H330 911 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 AVENQ9NQS1 362 aaPredicted RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 BLOC1S4Q9NUP1 217 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 HEY2Q9UBP5 337 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 C1QTNF3-AMACRE9PGA6 284 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 PIK3CDO00329 1044 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 NR5A2O00482 541 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 FGF10O15520 208 aaPredicted RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 PSMD10O75832 226 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 TRUB2O95900 331 aaKnown RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 PGAM1P18669 254 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 TYMPP19971 482 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 MGAT1P26572 445 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 CRYBB1P53674 252 aaPredicted RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 SNRPD1P62314 119 aaKnown RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 ZC3H12AQ5D1E8 599 aaKnown RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 ZNF697Q5TEC3 545 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 PDPK2PQ6A1A2 396 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 OTOP2Q7RTS6 562 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 TTC7BQ86TV6 843 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 MICU2Q8IYU8 434 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 KIF2BQ8N4N8 673 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 RSPH1Q8WYR4 309 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 APBB2Q92870 758 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 C18orf25Q96B23 403 aaPredicted RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 RHBGQ9H310 441 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 NMRAL1Q9HBL8 299 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 PCDHA3Q9Y5H8 950 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 KANSL1LA0AUZ9 987 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 CCT8L1PA6NM43 557 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 GLUD1P00367 558 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 ABCB1P08183 1280 aaPredicted RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 SLURP2P0DP57 97 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 TRIM60Q495X7 471 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 ZCCHC8Q6NZY4 707 aaKnown RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 MFSD7Q6UXD7 560 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 C1orf186Q6ZWK4 172 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 LRRC8DQ7L1W4 858 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 C7orf61Q8IZ16 206 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 VGLL2Q8N8G2 317 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 REPS1Q96D71 796 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 KLRG1Q96E93 195 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 PHF21BQ96EK2 531 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 FAM120BQ96EK7 910 aaKnown RBP6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 SLC4A9Q96Q91 983 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 CERS4Q9HA82 394 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 ZFYVE1Q9HBF4 777 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 ZNF229Q9UJW7 825 aa6.52□□□□□ -1.37
UBQLN1-206ENST00000533705 WDR27A2RRH5 827 aa6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 TRDMT1O14717 391 aaKnown RBP6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 ZBTB14O43829 449 aa6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 TBL1XO60907 577 aa6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 ZNF682O95780 498 aa6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 FGBP02675 491 aa6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 NFICP08651 508 aa6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 CRABP2P29373 138 aa6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 ELK3P41970 407 aa6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 MMRN1Q13201 1228 aa6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 CYP2A13Q16696 494 aa6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 SPANXN3Q5MJ09 141 aa6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 ATAD3BQ5T9A4 648 aa6.51□□□□□ -1.37
UBQLN1-206ENST00000533705 GRTP1Q5TC63 336 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms