RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 KLHL28Q9NXS3 571 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 MYRFQ9Y2G1 1151 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 NCANO14594 1321 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 PNMA8CA0A1B0GUJ8 204 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 DYRK3O43781 588 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 BCL10O95999 233 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 CXCL8P10145 99 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 FLT3P36888 993 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 RAP1GAPP47736 663 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 NDST1P52848 882 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 CASP7P55210 303 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 PSMC6P62333 389 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 VAC14Q08AM6 782 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 CDC16Q13042 620 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 DDX39BQ13838 428 aaKnown RBP7.16□□□□□ -1.26
CTNND1-236ENST00000533667 FASTKQ14296 549 aaKnown RBP7.16□□□□□ -1.26
CTNND1-236ENST00000533667 TRIM71Q2Q1W2 868 aaKnown RBP7.16□□□□□ -1.26
CTNND1-236ENST00000533667 FAAH2Q6GMR7 532 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 MFSD7Q6UXD7 560 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 MIB1Q86YT6 1006 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 ATG16L2Q8NAA4 619 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 CKAP2Q8WWK9 683 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 MTMR9Q96QG7 549 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 ENTPD7Q9NQZ7 604 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 DPP7Q9UHL4 492 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 VPS28Q9UK41 221 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 A0A087WXM4 84 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 A0A087WZ62 844 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 CARNS1A5YM72 827 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 KPNA4O00629 521 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-236ENST00000533667 MRASO14807 208 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 RAMP2O60895 175 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 MICAL2O94851 1124 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 BMP10O95393 424 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 DPEP1P16444 411 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 SCRN3Q0VDG4 424 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 ST3GAL1Q11201 340 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 ORC1Q13415 861 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 FRG1Q14331 258 aaKnown RBP7.16□□□□□ -1.26
CTNND1-236ENST00000533667 DDR2Q16832 855 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 PARP6Q2NL67 630 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 PGS1Q32NB8 556 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 FKBP1CQ5VVH2 108 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 RNF43Q68DV7 783 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 ZNF554Q86TJ5 538 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 TMEM110Q86TL2 294 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 ITIH5Q86UX2 942 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 TRIM48Q8IWZ4 208 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 CHCHD4Q8N4Q1 142 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 FDXACB1Q9BRP7 624 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-236ENST00000533667 IDI2Q9BXS1 227 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 CCSER2Q9H7U1 834 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 IL17RBQ9NRM6 502 aa7.16□□□□□ -1.26
CTNND1-236ENST00000533667 CCDC189A1A4V9 331 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 NCF1BA6NI72 391 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 NCF1CA8MVU1 366 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 RNASEH1O60930 286 aaKnown RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 BAIAP3O94812 1187 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 UPP2O95045 317 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ZNF682O95780 498 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 CYP1A2P05177 515 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ANXA6P08133 673 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 NCF1P14598 390 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 FCHO2Q0JRZ9 810 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 EFEMP1Q12805 493 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 TRAF2Q12933 501 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ZCCHC8Q6NZY4 707 aaKnown RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ADGRA1Q86SQ6 560 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 UNC93AQ86WB7 457 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 STK40Q8N2I9 435 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 TMEM86AQ8N2M4 240 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 AADATQ8N5Z0 425 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 OR6Y1Q8NGX8 325 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 L3MBTL3Q96JM7 780 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 TSEN34Q9BSV6 310 aaKnown RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ZCCHC2Q9C0B9 1178 aaKnown RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ELOVL4Q9GZR5 314 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ATAD3AQ9NVI7 634 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 DDX43Q9NXZ2 648 aaKnown RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 KLHL20Q9Y2M5 609 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 TMED5Q9Y3A6 229 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 DCCP43146 1447 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 GNG14A0A1W2PPG7 69 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 WDR27A2RRH5 827 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 H3BMM5 538 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 CLOCKO15516 846 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 RTN3O95197 1032 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 MED26O95402 600 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ERBB2P04626 1255 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 EPHB3P54753 998 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 PLD1Q13393 1074 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 DPYSL3Q14195 570 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 PHKG1Q16816 387 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 SAMD7Q7Z3H4 446 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ILDR1Q86SU0 546 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 SLC9A9Q8IVB4 645 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ZNF557Q8N988 423 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ACMSDQ8TDX5 336 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ZNF184Q99676 751 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 TBL1YQ9BQ87 522 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms