RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 IL21RQ9HBE5 538 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 POPDC2Q9HBU9 364 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 RWDD2AQ9UIY3 292 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 NCKAP1Q9Y2A7 1128 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 SYNJ2BP-COX16A0A087WUM0 186 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 A0A1B0GVT2 93 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 ZZEF1O43149 2961 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 PAPSS1O43252 624 aaPredicted RBP18.45■□□□□ 0.54
PCF11-206ENST00000533018 GJB3O75712 270 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 SLC9A1P19634 815 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 RPL34P49207 117 aaKnown RBP18.45■□□□□ 0.54
PCF11-206ENST00000533018 AFF3P51826 1226 aaKnown RBP18.45■□□□□ 0.54
PCF11-206ENST00000533018 YWHAZP63104 245 aaKnown RBP18.45■□□□□ 0.54
PCF11-206ENST00000533018 NNTQ13423 1086 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 ZNF423Q2M1K9 1284 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 HLA-BQ31612 363 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 DCAF6Q58WW2 860 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 ZC3H12AQ5D1E8 599 aaKnown RBP18.45■□□□□ 0.54
PCF11-206ENST00000533018 FSCBQ5H9T9 825 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 RAP1GAP2Q684P5 730 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 TRIM65Q6PJ69 517 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 MMS22LQ6ZRQ5 1243 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 CHSY1Q86X52 802 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 DHX40Q8IX18 779 aaKnown RBP18.45■□□□□ 0.54
PCF11-206ENST00000533018 RNF34Q969K3 372 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 TTC17Q96AE7 1141 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 SLC39A13Q96H72 371 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 FAM81BQ96LP2 452 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 SLC4A5Q9BY07 1137 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 COX16Q9P0S2 106 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 KIAA1468Q9P260 1216 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 SLC12A6Q9UHW9 1150 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 CYTH4Q9UIA0 394 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 XPO7Q9UIA9 1087 aaKnown RBP18.45■□□□□ 0.54
PCF11-206ENST00000533018 KLK13Q9UKR3 277 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.45■□□□□ 0.54
PCF11-206ENST00000533018 NEUROG3Q9Y4Z2 214 aa18.45■□□□□ 0.54
PCF11-206ENST00000533018 CABIN1Q9Y6J0 2220 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 FAM47DPA6NHR8 397 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 LUC7L3O95232 432 aaKnown RBP18.44■□□□□ 0.54
PCF11-206ENST00000533018 TRUB2O95900 331 aaKnown RBP18.44■□□□□ 0.54
PCF11-206ENST00000533018 ASLP04424 464 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 TEAD4Q15561 434 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 TPD52L1Q16890 204 aaPredicted RBP18.44■□□□□ 0.54
PCF11-206ENST00000533018 PITRM1Q5JRX3 1037 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 RNF219Q5W0B1 726 aaPredicted RBP18.44■□□□□ 0.54
PCF11-206ENST00000533018 GBP6Q6ZN66 633 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 BEND5Q7L4P6 421 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 TMEM110Q86TL2 294 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 THAP9Q9H5L6 903 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 FAM204AQ9H8W3 233 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 SGK2Q9HBY8 427 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 TM7SF3Q9NS93 570 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 KIAA1522Q9P206 1035 aaPredicted RBP18.44■□□□□ 0.54
PCF11-206ENST00000533018 INTS6Q9UL03 887 aaKnown RBP18.44■□□□□ 0.54
PCF11-206ENST00000533018 ERVW-1Q9UQF0 538 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 MSRB2Q9Y3D2 182 aa18.44■□□□□ 0.54
PCF11-206ENST00000533018 SIN3BO75182 1162 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 TACR2P21452 398 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 CTSOP43234 321 aaPredicted RBP18.43■□□□□ 0.54
PCF11-206ENST00000533018 MTIF2P46199 727 aaKnown RBP18.43■□□□□ 0.54
PCF11-206ENST00000533018 NUMBP49757 651 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 APBA1Q02410 837 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 PDCLQ13371 301 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 TAF5Q15542 800 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 MEA1Q16626 185 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 ADAT2Q7Z6V5 191 aaKnown RBP18.43■□□□□ 0.54
PCF11-206ENST00000533018 PASD1Q8IV76 773 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 PNPLA1Q8N8W4 532 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 ATP6V0D2Q8N8Y2 350 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 GATA6Q92908 595 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 BIRC7Q96CA5 298 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 LMLNQ96KR4 655 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 BTN2A3PQ96KV6 586 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 RSPH9Q9H1X1 276 aaPredicted RBP18.43■□□□□ 0.54
PCF11-206ENST00000533018 FBXL12Q9NXK8 326 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 APEX2Q9UBZ4 518 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 FNDC3AQ9Y2H6 1198 aaKnown RBP18.43■□□□□ 0.54
PCF11-206ENST00000533018 SLCO1B1Q9Y6L6 691 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 TMEM131Q92545 1883 aa18.43■□□□□ 0.54
PCF11-206ENST00000533018 TMEM8BA6NDV4 472 aa18.42■□□□□ 0.54
PCF11-206ENST00000533018 F5H5T6 163 aa18.42■□□□□ 0.54
PCF11-206ENST00000533018 FTH1P19P0C7X4 201 aa18.42■□□□□ 0.54
PCF11-206ENST00000533018 ABCB4P21439 1286 aa18.42■□□□□ 0.54
PCF11-206ENST00000533018 UBE2HP62256 183 aa18.42■□□□□ 0.54
PCF11-206ENST00000533018 CDK17Q00537 523 aa18.42■□□□□ 0.54
PCF11-206ENST00000533018 ECT2LQ008S8 904 aa18.42■□□□□ 0.54
PCF11-206ENST00000533018 BNC1Q01954 994 aa18.42■□□□□ 0.54
PCF11-206ENST00000533018 SFSWAPQ12872 951 aaKnown RBP18.42■□□□□ 0.54
PCF11-206ENST00000533018 EXOC3L4Q17RC7 722 aa18.42■□□□□ 0.54
PCF11-206ENST00000533018 HNRNPA1L2Q32P51 320 aaKnown RBP18.42■□□□□ 0.54
PCF11-206ENST00000533018 KDF1Q8NAX2 398 aaPredicted RBP18.42■□□□□ 0.54
PCF11-206ENST00000533018 C1orf216Q8TAB5 229 aa18.42■□□□□ 0.54
PCF11-206ENST00000533018 MYO19Q96H55 970 aa18.42■□□□□ 0.54
PCF11-206ENST00000533018 RPL10LQ96L21 214 aaKnown RBP18.42■□□□□ 0.54
PCF11-206ENST00000533018 OMDQ99983 421 aa18.42■□□□□ 0.54
PCF11-206ENST00000533018 TMEM121BQ9BXQ6 578 aaPredicted RBP18.42■□□□□ 0.54
PCF11-206ENST00000533018 PABPC3Q9H361 631 aaKnown RBP18.42■□□□□ 0.54
PCF11-206ENST00000533018 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.42■□□□□ 0.54
PCF11-206ENST00000533018 SCML1Q9UN30 329 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms