RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 POLR2EP19388 210 aaKnown RBP15.88■□□□□ 0.13
CPSF1-210ENST00000532935 NDUFV2P19404 249 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 BCKDHBP21953 392 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 PRKCHP24723 683 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 UBASH3AP57075 661 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 SPEM2Q0P670 501 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 AUHQ13825 339 aaKnown RBP15.88■□□□□ 0.13
CPSF1-210ENST00000532935 STARD3Q14849 445 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 ELF2Q15723 593 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 MAP7D1Q3KQU3 841 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 FUT11Q495W5 492 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 FNDC3BQ53EP0 1204 aaKnown RBP15.88■□□□□ 0.13
CPSF1-210ENST00000532935 FSCBQ5H9T9 825 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 RABGAP1LQ5R372 815 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 TTC39BQ5VTQ0 682 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-210ENST00000532935 FBXL22Q6P050 247 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 SERPINA13PQ6UXR4 307 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 BNIPLQ7Z465 357 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 GPR161Q8N6U8 529 aaKnown RBP15.88■□□□□ 0.13
CPSF1-210ENST00000532935 EMC1Q8N766 993 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 SPACA7Q96KW9 195 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 TTYH3Q9C0H2 523 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 TKTL2Q9H0I9 626 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 PARD6AQ9NPB6 346 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 PLA2G4CQ9UP65 541 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 PAXBP1Q9Y5B6 917 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 HS3ST4Q9Y661 456 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 DCHS1Q96JQ0 3298 aa15.88■□□□□ 0.13
CPSF1-210ENST00000532935 SYNCRIPO60506 623 aaKnown RBP15.87■□□□□ 0.13
CPSF1-210ENST00000532935 LRP3O75074 770 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 EPN2O95208 641 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 CALB1P05937 261 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 ATP5BP06576 529 aaKnown RBP15.87■□□□□ 0.13
CPSF1-210ENST00000532935 DLDP09622 509 aaKnown RBP15.87■□□□□ 0.13
CPSF1-210ENST00000532935 TGM1P22735 817 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 RDXP35241 583 aaKnown RBP15.87■□□□□ 0.13
CPSF1-210ENST00000532935 GGCXP38435 758 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 ATXN1P54253 815 aaKnown RBP15.87■□□□□ 0.13
CPSF1-210ENST00000532935 GSCP56915 257 aaPredicted RBP15.87■□□□□ 0.13
CPSF1-210ENST00000532935 BYSLQ13895 437 aaKnown RBP15.87■□□□□ 0.13
CPSF1-210ENST00000532935 ASIC2Q16515 512 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 PTPRNQ16849 979 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 FIGNQ5HY92 759 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 MON1BQ7L1V2 547 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 CIR1Q86X95 450 aaPredicted RBP15.87■□□□□ 0.13
CPSF1-210ENST00000532935 FRMD1Q8N878 549 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 JOSD2Q8TAC2 188 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 IGSF8Q969P0 613 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 TTC17Q96AE7 1141 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 MRGPRX1Q96LB2 322 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 RPRD1AQ96P16 312 aaPredicted RBP15.87■□□□□ 0.13
CPSF1-210ENST00000532935 SYT11Q9BT88 431 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 EDEM3Q9BZQ6 932 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 SIK2Q9H0K1 926 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 SLC6A17Q9H1V8 727 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 ANLNQ9NQW6 1124 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 AIPL1Q9NZN9 384 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 KIAA1522Q9P206 1035 aaPredicted RBP15.87■□□□□ 0.13
CPSF1-210ENST00000532935 INTS6Q9UL03 887 aaKnown RBP15.87■□□□□ 0.13
CPSF1-210ENST00000532935 VANGL2Q9ULK5 521 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 USP18Q9UMW8 372 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 CEP250Q9BV73 2442 aa15.87■□□□□ 0.13
CPSF1-210ENST00000532935 A0A1B0GVM2 712 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 TCAF2A6NFQ2 919 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 C2CD4BA6NLJ0 364 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 I6L893 689 aaPredicted RBP15.86■□□□□ 0.13
CPSF1-210ENST00000532935 GJB6O95452 261 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 EPHX1P07099 455 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 HLA-EP13747 358 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 PDGFRAP16234 1089 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 TNFAIP3P21580 790 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 PBX1P40424 430 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 CSKP41240 450 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 C1QBPQ07021 282 aaKnown RBP15.86■□□□□ 0.13
CPSF1-210ENST00000532935 PITRM1Q5JRX3 1037 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 SFMBT2Q5VUG0 894 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 E4F1Q66K89 784 aaPredicted RBP15.86■□□□□ 0.13
CPSF1-210ENST00000532935 PMS2CLQ68D20 193 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 ACAD10Q6JQN1 1059 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 C14orf80Q86SX3 495 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 CCAR2Q8N163 923 aaKnown RBP15.86■□□□□ 0.13
CPSF1-210ENST00000532935 RXFP2Q8WXD0 754 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 NUP58Q9BVL2 599 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 SELENOOQ9BVL4 669 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 ARRDC1-AS1Q9H2J1 176 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 TMEM245Q9H330 911 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 MBD1Q9UIS9 605 aaPredicted RBP15.86■□□□□ 0.13
CPSF1-210ENST00000532935 GON4LQ3T8J9 2241 aa15.86■□□□□ 0.13
CPSF1-210ENST00000532935 DNAH14Q0VDD8 3507 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 PI4KAP42356 2102 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 MAP3K13O43283 966 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 ENDOD1O94919 500 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 MOCS3O95396 460 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 ASLP04424 464 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 KRT3P12035 628 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 SDC4P31431 198 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 PRKCIP41743 596 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 PTPN9P43378 593 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 IRAK1P51617 712 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 ATP11AP98196 1134 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms