RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	RXFP1	Q9HBX9	757 aa		19.95	■□□□□ 0.78
FGFR1-238	ENST00000532791	A1CF	Q9NQ94	594 aa	Known RBP	19.95	■□□□□ 0.78
FGFR1-238	ENST00000532791	CROT	Q9UKG9	612 aa		19.95	■□□□□ 0.78
FGFR1-238	ENST00000532791	STARD13	Q9Y3M8	1113 aa		19.95	■□□□□ 0.78
FGFR1-238	ENST00000532791	GAK	O14976	1311 aa		19.95	■□□□□ 0.78
FGFR1-238	ENST00000532791	UMODL1	Q5DID0	1318 aa		19.95	■□□□□ 0.78
FGFR1-238	ENST00000532791	KCNK1	O00180	336 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	CNP	P09543	421 aa	Known RBP	19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	HOXC6	P09630	235 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	ACVR2B	Q13705	512 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	MRPS26	Q9BYN8	205 aa	Known RBP	19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	L1RE1	Q9UN81	338 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791		H0YC42	278 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	RPN2	P04844	631 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	PECAM1	P16284	738 aa	Predicted RBP	19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	GSTA3	Q16772	222 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	ARMCX4	Q5H9R4	360 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	HDDC2	Q7Z4H3	204 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	PANX3	Q96QZ0	392 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	APBA2	Q99767	749 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	LRRC4B	Q9NT99	713 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	ADAM30	Q9UKF2	790 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	DUSP12	Q9UNI6	340 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	SATB2	Q9UPW6	733 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	USP17L7	P0C7H9	530 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	NOS3	P29474	1203 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	GRIK3	Q13003	919 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	FNDC3B	Q53EP0	1204 aa	Known RBP	19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	HLA-DQA1	Q5Y7H0	255 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	CES3	Q6UWW8	571 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	C16orf59	Q7L2K0	433 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	BNIPL	Q7Z465	357 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	METTL6	Q8TCB7	284 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	TCP10L	Q8TDR4	215 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	HIC2	Q96JB3	615 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	OSBPL6	Q9BZF3	934 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	TKTL2	Q9H0I9	626 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	ZMYM2	Q9UBW7	1377 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	UBOX5	O94941	541 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	TYMP	P19971	482 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	DOK6	Q6PKX4	331 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	IZUMO2	Q6UXV1	221 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	SH3GL2	Q99962	352 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	CCDC154	A6NI56	674 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	WNT10B	O00744	389 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	CYP1A1	P04798	512 aa	Predicted RBP	19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	PABPC1	P11940	636 aa	Known RBP	19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	BDNF	P23560	247 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	HIRA	P54198	1017 aa	Predicted RBP	19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	FASTK	Q14296	549 aa	Known RBP	19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	KCNQ5	Q9NR82	932 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	NCKAP1	Q9Y2A7	1128 aa		19.94	■□□□□ 0.78
FGFR1-238	ENST00000532791	BTN3A1	O00481	513 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	MTA2	O94776	668 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	LTF	P02788	710 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	NFIC	P08651	508 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	TALDO1	P37837	337 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	RPL21	P46778	160 aa	Known RBP	19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	CNTN2	Q02246	1040 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	PPAT	Q06203	517 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	TRMT5	Q32P41	509 aa	Known RBP	19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	IRAK1BP1	Q5VVH5	260 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	SLC35C1	Q96A29	364 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	THAP1	Q9NVV9	213 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	STK39	Q9UEW8	545 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	ADM5	C9JUS6	153 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	OSCP1	Q8WVF1	389 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	LMTK2	Q8IWU2	1503 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	FAM20B	O75063	409 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	MIP	P30301	263 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	SSTR1	P30872	391 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	RAB14	P61106	215 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	ARMC12	Q5T9G4	340 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	KCNT2	Q6UVM3	1135 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	MAP4K3	Q8IVH8	894 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	SEMA4D	Q92854	862 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	ZBTB45	Q96K62	511 aa	Predicted RBP	19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	TMEM79	Q9BSE2	394 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	NDOR1	Q9UHB4	597 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	ZMYM5	Q9UJ78	669 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	TSC22D4	Q9Y3Q8	395 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	ADCYAP1R1	P41586	468 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	BBS4	Q96RK4	519 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	CXorf56	Q9H5V9	222 aa		19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	GEMIN8	Q9NWZ8	242 aa	Known RBP	19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	MRPL42	Q9Y6G3	142 aa	Known RBP	19.93	■□□□□ 0.78
FGFR1-238	ENST00000532791	KPNA3	O00505	521 aa	Predicted RBP	19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	NBN	O60934	754 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	EIF4B	P23588	611 aa	Known RBP	19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	FMO4	P31512	558 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	MMP13	P45452	471 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	DHFR2	Q86XF0	187 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	TMEM86A	Q8N2M4	240 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	NACC2	Q96BF6	587 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	AVEN	Q9NQS1	362 aa	Predicted RBP	19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791		E5RJQ4	531 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	ATG7	O95352	703 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	RARA	P10276	462 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	NUP62	P37198	522 aa	Predicted RBP	19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	GPR15	P49685	360 aa		19.92	■□□□□ 0.78

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms