RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 ZDHHC4Q9NPG8 344 aa15.54■□□□□ 0.08
CPSF1-208ENST00000532560 ANLNQ9NQW6 1124 aa15.54■□□□□ 0.08
CPSF1-208ENST00000532560 ELOVL2Q9NXB9 296 aa15.54■□□□□ 0.08
CPSF1-208ENST00000532560 THAP10Q9P2Z0 257 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-208ENST00000532560 PIEZO1Q92508 2521 aa15.54■□□□□ 0.08
CPSF1-208ENST00000532560 MUC22E2RYF6 1773 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-208ENST00000532560 A0A1B0GVM2 712 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 TCAF2A6NFQ2 919 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 RTN2O75298 545 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 FTLP02792 175 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-208ENST00000532560 PLEKP08567 350 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-208ENST00000532560 HOXB2P14652 356 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 MSNP26038 577 aaKnown RBP15.53■□□□□ 0.08
CPSF1-208ENST00000532560 CD70P32970 193 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 CNR2P34972 360 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 ZNF143P52747 638 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-208ENST00000532560 LMAN2Q12907 356 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 MAMLD1Q13495 774 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 ENPP2Q13822 863 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 CDO1Q16878 200 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 FUT11Q495W5 492 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 C5orf22Q49AR2 442 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 PLEKHA7Q6IQ23 1121 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 WDR59Q6PJI9 974 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 ADIPOR2Q86V24 386 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 FAM131BQ86XD5 332 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 DRC7Q8IY82 874 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 CHPFQ8IZ52 775 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 CARNMT1Q8N4J0 409 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 C1orf74Q96LT6 269 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 RPRD1AQ96P16 312 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-208ENST00000532560 HAPLN3Q96S86 360 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 CIPCQ9C0C6 399 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 ISCUQ9H1K1 167 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 POLMQ9NP87 494 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-208ENST00000532560 PARVAQ9NVD7 372 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 ADAMTS1Q9UHI8 967 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 VANGL2Q9ULK5 521 aa15.53■□□□□ 0.08
CPSF1-208ENST00000532560 A0A1W2PQF6 199 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 H0Y626 953 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 AXIN1O15169 862 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 ALDH1A2O94788 518 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 TPM1P09493 284 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 MYBL1P10243 752 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 PXNP49023 591 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-208ENST00000532560 HDAC4P56524 1084 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 RPL7AP62424 266 aaKnown RBP15.52■□□□□ 0.08
CPSF1-208ENST00000532560 RAB6CQ53S08 254 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 SH3PXD2AQ5TCZ1 1133 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 MBLAC2Q68D91 279 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 SDE2Q6IQ49 451 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 DCUN1D2Q6PH85 259 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 CIR1Q86X95 450 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-208ENST00000532560 ZNF683Q8IZ20 524 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 CCAR2Q8N163 923 aaKnown RBP15.52■□□□□ 0.08
CPSF1-208ENST00000532560 MDGA1Q8NFP4 955 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 FAM172AQ8WUF8 416 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 IGSF8Q969P0 613 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 ZNF653Q96CK0 615 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 SIK2Q9H0K1 926 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 RAB6CQ9H0N0 254 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 CD248Q9HCU0 757 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 CACNA2D2Q9NY47 1150 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 ARHGAP20Q9P2F6 1191 aa15.52■□□□□ 0.08
CPSF1-208ENST00000532560 IGLV3-10A0A075B6K4 115 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 TCRBV21S2A2A0A5A6 115 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 PRR23AA6NEV1 266 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 AP5Z1O43299 807 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 CCP110O43303 1012 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 ATMINO43313 823 aaPredicted RBP15.51■□□□□ 0.07
CPSF1-208ENST00000532560 MFAP3LO75121 409 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 LMNAP02545 664 aaKnown RBP15.51■□□□□ 0.07
CPSF1-208ENST00000532560 ATP5BP06576 529 aaKnown RBP15.51■□□□□ 0.07
CPSF1-208ENST00000532560 DLDP09622 509 aaKnown RBP15.51■□□□□ 0.07
CPSF1-208ENST00000532560 GGCXP38435 758 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 IL12RB1P42701 662 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 OXCT1P55809 520 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 NRG1Q02297 640 aaPredicted RBP15.51■□□□□ 0.07
CPSF1-208ENST00000532560 ZNF234Q14588 700 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 ARL13BQ3SXY8 428 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 FSCBQ5H9T9 825 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 ANO7Q6IWH7 933 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 C14orf80Q86SX3 495 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 OR8K1Q8NGG5 319 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 SORCS1Q8WY21 1168 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 NTAN1Q96AB6 310 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 CNPY3Q9BT09 278 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.51■□□□□ 0.07
CPSF1-208ENST00000532560 TRIM5Q9C035 493 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 TMPRSS4Q9NRS4 437 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 KIAA1522Q9P206 1035 aaPredicted RBP15.51■□□□□ 0.07
CPSF1-208ENST00000532560 CNOT8Q9UFF9 292 aaKnown RBP15.51■□□□□ 0.07
CPSF1-208ENST00000532560 STON1Q9Y6Q2 735 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 SCINQ9Y6U3 715 aa15.51■□□□□ 0.07
CPSF1-208ENST00000532560 EML5Q05BV3 1969 aa15.5■□□□□ 0.07
CPSF1-208ENST00000532560 A0A087X0T9 212 aa15.5■□□□□ 0.07
CPSF1-208ENST00000532560 DRGXA6NNA5 263 aa15.5■□□□□ 0.07
CPSF1-208ENST00000532560 HRO43593 1189 aa15.5■□□□□ 0.07
CPSF1-208ENST00000532560 CLDN11O75508 207 aa15.5■□□□□ 0.07
CPSF1-208ENST00000532560 MOCS3O95396 460 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms