RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RPRD1BQ9NQG5 326 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 CYP26B1Q9NR63 512 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 TMEM39AQ9NV64 488 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 PRG3Q9Y2Y8 225 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 MYADML2A6NDP7 307 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 SNAI1O95863 264 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 THRAP10827 490 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 VDRP11473 427 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 STT3AP46977 705 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 KPNA1P52294 538 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 PHC1P78364 1004 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 GRIK4Q16099 956 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 MYLK3Q32MK0 819 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 WDR44Q5JSH3 913 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 CELF3Q5SZQ8 465 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 C17orf99Q6UX52 265 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 CYP2U1Q7Z449 544 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 IFNLR1Q8IU57 520 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 ARRDC4Q8NCT1 418 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 GABPB2Q8TAK5 448 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 NRG4Q8WWG1 115 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 RASSF5Q8WWW0 418 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 SCLYQ96I15 445 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 WDR12Q9GZL7 423 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 ADAM7Q9H2U9 754 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 USP29Q9HBJ7 922 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 N6AMT1Q9Y5N5 214 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 AKAP11Q9UKA4 1901 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 C17orf102A2RUQ5 167 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 PRPF4O43172 522 aaKnown RBP eCLIP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 TREHO43280 583 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 CNMDO75829 334 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 SEMA3DO95025 777 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 SNRPAP09012 282 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 NELFEP18615 380 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 GCLMP48507 274 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 CASP4P49662 377 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 HSD17B4P51659 736 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 RAD23AP54725 363 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 MFSD10Q14728 455 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 RPS6KA2Q15349 733 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 ARL13BQ3SXY8 428 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 KRT39Q6A163 491 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 ELMSAN1Q6PJG2 1045 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 ALYREFQ86V81 257 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 S100ZQ8WXG8 99 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 PRICKLE1Q96MT3 831 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 PAFAH2Q99487 392 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 OSBPL11Q9BXB4 747 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 MRPL47Q9HD33 250 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 DDX43Q9NXZ2 648 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 STK39Q9UEW8 545 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 LGALS13Q9UHV8 139 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 POLIQ9UNA4 740 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 SLC8A2Q9UPR5 921 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 ERVK-11Q9UQG0 969 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 PCDHGA3Q9Y5H0 932 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 SAC3D1A6NKF1 404 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 J3QRK9 145 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 MTSS1O43312 755 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 TMEM191BP0C7N4 346 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 ACRP10323 421 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 ECHS1P30084 290 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 CHKAP35790 457 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 PHKA2P46019 1235 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 TFDP1Q14186 410 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 SLC1A5Q15758 541 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 KNOP1Q1ED39 458 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 C6orf52Q5T4I8 152 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 PRR23CQ6ZRP0 262 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 OTOP2Q7RTS6 562 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 PALB2Q86YC2 1186 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 RHOT1Q8IXI2 618 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 SLC15A3Q8IY34 581 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 DAGLBQ8NCG7 672 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 SHCBP1Q8NEM2 672 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 REPS2Q8NFH8 660 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 DLG3Q92796 817 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 FBXL8Q96CD0 374 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 MAGED4Q96JG8 741 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 ZBTB45Q96K62 511 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 BIRC8Q96P09 236 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 C17orf80Q9BSJ5 609 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 CENPOQ9BU64 300 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 UNKQ9C0B0 810 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 CXorf21Q9HAI6 301 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 ERVK-5Q9HDB9 667 aa6.95□□□□□ -1.3
TGFBR3-209ENST00000532540 TRIM49D1C9J1S8 452 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 CLDN25C9JDP6 229 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 CLOCKO15516 846 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 SERPINB7O75635 380 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 DGKIO75912 1065 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 CRTAMO95727 393 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 WEE2P0C1S8 567 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 AKAP5P24588 427 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 BCAR1P56945 870 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 GNG2P59768 71 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 COPZ1P61923 177 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 DYNLT1P63172 113 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 INPP5AQ14642 412 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms