RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 ITGALP20701 1170 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 TUFMP49411 452 aaKnown RBP8.28□□□□□ -1.08
CTNND1-231ENST00000532463 GPR15P49685 360 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 RGS6P49758 472 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 RGS7P49802 495 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 CDK9P50750 372 aaKnown RBP8.28□□□□□ -1.08
CTNND1-231ENST00000532463 SCN1BQ07699 218 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 IL18Q14116 193 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 PDK3Q15120 406 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 VMACQ2NL98 169 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 LCN1P1Q5VSP4 162 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 ATG9AQ7Z3C6 839 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 ATCAYQ86WG3 371 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 PHACTR4Q8IZ21 702 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 EIF1ADQ8N9N8 165 aaKnown RBP8.28□□□□□ -1.08
CTNND1-231ENST00000532463 TFB1MQ8WVM0 346 aaKnown RBP8.28□□□□□ -1.08
CTNND1-231ENST00000532463 DNAJA4Q8WW22 397 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-231ENST00000532463 POP5Q969H6 163 aaKnown RBP8.28□□□□□ -1.08
CTNND1-231ENST00000532463 NDNQ99608 321 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 ZSCAN5AQ9BUG6 496 aa8.28□□□□□ -1.08
CTNND1-231ENST00000532463 AGO2Q9UKV8 859 aaKnown RBP8.28□□□□□ -1.08
CTNND1-231ENST00000532463 PPIEQ9UNP9 301 aaKnown RBP8.28□□□□□ -1.08
CTNND1-231ENST00000532463 ATXN2Q99700 1313 aaKnown RBP8.27□□□□□ -1.08
CTNND1-231ENST00000532463 SH2B2O14492 632 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-231ENST00000532463 SLC16A3O15427 465 aaKnown RBP8.27□□□□□ -1.08
CTNND1-231ENST00000532463 TCF7P36402 384 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-231ENST00000532463 RBM34P42696 430 aaKnown RBP8.27□□□□□ -1.08
CTNND1-231ENST00000532463 TNK2Q07912 1038 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 MTMR1Q13613 665 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 BMT2Q1RMZ1 405 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 GPR107Q5VW38 600 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 CYP2R1Q6VVX0 501 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 OR5T3Q8NGG3 340 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 GMCL1Q96IK5 515 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 BBS4Q96RK4 519 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 ACOX2Q99424 681 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 CDCA7Q9BWT1 371 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-231ENST00000532463 LRRC40Q9H9A6 602 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 SENP2Q9HC62 589 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 CATSPERZQ9NTU4 200 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 TMEM216Q9P0N5 145 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 SH3BP1Q9Y3L3 701 aa8.27□□□□□ -1.08
CTNND1-231ENST00000532463 PCYT1BQ9Y5K3 369 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-231ENST00000532463 MROH7-TTC4A0A0A0MT08 1334 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 SDR42E2A6NKP2 422 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 TTC34A8MYJ7 566 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 RSL1D1O76021 490 aaKnown RBP8.27□□□□□ -1.09
CTNND1-231ENST00000532463 CYP21A2P08686 494 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 FAM153BP0C7A2 387 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 ITGA2P17301 1181 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 ILF3Q12906 894 aaKnown RBP eCLIP8.27□□□□□ -1.092e-7■■□□□ 13.8
CTNND1-231ENST00000532463 OSBP2Q969R2 916 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 REPS1Q96D71 796 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 BTBD9Q96Q07 612 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 RIT2Q99578 217 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 MAGEE1Q9HCI5 957 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 SAR1AQ9NR31 198 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 CKLFQ9UBR5 152 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 SLC24A2Q9UI40 661 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 EDARQ9UNE0 448 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 ZNF232Q9UNY5 417 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 HPCAL1P37235 193 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 GYG1P46976 350 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 CCR4P51679 360 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 SKP1P63208 163 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 FAM187BQ17R55 369 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 GXYLT1Q4G148 440 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 ZMYM1Q5SVZ6 1142 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 OAFQ86UD1 273 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 SLCO6A1Q86UG4 719 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-231ENST00000532463 FAM71DQ8N9W8 422 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 C8orf37Q96NL8 207 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 TRNT1Q96Q11 434 aaKnown RBP8.27□□□□□ -1.09
CTNND1-231ENST00000532463 RSPH9Q9H1X1 276 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-231ENST00000532463 SEMA6AQ9H2E6 1030 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 OSBPL3Q9H4L5 887 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 TMBIM4Q9HC24 238 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 NEUROD4Q9HD90 331 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.27□□□□□ -1.092e-7■■□□□ 14.4
CTNND1-231ENST00000532463 KAT6BQ8WYB5 2073 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 ZFYVE9O95405 1425 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 FCHO1O14526 889 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 TEX33O43247 280 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 ORC5O43913 435 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 SSX4O60224 188 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 FGFR2P21802 821 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 FSHRP23945 695 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 CLK2P49760 499 aaKnown RBP8.27□□□□□ -1.09
CTNND1-231ENST00000532463 GLRA4Q5JXX5 417 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 PAGE2Q7Z2X7 111 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 SLC26A11Q86WA9 606 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 PHC2Q8IXK0 858 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 ZZZ3Q8IYH5 903 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 FNDC5Q8NAU1 212 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 DNAJC1Q96KC8 554 aaKnown RBP8.27□□□□□ -1.09
CTNND1-231ENST00000532463 AIFM3Q96NN9 605 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 KLHL5Q96PQ7 755 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 PLEKHF1Q96S99 279 aa8.27□□□□□ -1.09
CTNND1-231ENST00000532463 ZNF471Q9BX82 626 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms