RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 BOLA3Q53S33 107 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 DGKKQ5KSL6 1271 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 CIR1Q86X95 450 aaPredicted RBP22.98■■□□□ 1.27
LRRK1-208ENST00000532029 PSTKQ8IV42 348 aaKnown RBP22.98■■□□□ 1.27
LRRK1-208ENST00000532029 CCAR2Q8N163 923 aaKnown RBP22.98■■□□□ 1.27
LRRK1-208ENST00000532029 TERB1Q8NA31 727 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 EPAS1Q99814 870 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 ZWILCHQ9H900 591 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 LMAN1LQ9HAT1 526 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 C11orf16Q9NQ32 467 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 GPATCH2LQ9NWQ4 482 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 CLEC4EQ9ULY5 219 aa22.98■■□□□ 1.27
LRRK1-208ENST00000532029 TECTAO75443 2155 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 TBC1D3BA6NDS4 549 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 DRGXA6NNA5 263 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 CLDN11O75508 207 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 EGFP01133 1207 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 CISD3P0C7P0 127 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 L1CAMP32004 1257 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 CLCN5P51795 746 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 CDH4P55283 916 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 CCDC173Q0VFZ6 552 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 TMEM31Q5JXX7 168 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 RNF43Q68DV7 783 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 ASTLQ6HA08 431 aaPredicted RBP22.97■■□□□ 1.27
LRRK1-208ENST00000532029 RWDD4Q6NW29 188 aaKnown RBP22.97■■□□□ 1.27
LRRK1-208ENST00000532029 CHST9Q7L1S5 443 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 CCDC105Q8IYK2 499 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 ZNF683Q8IZ20 524 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 PYROXD2Q8N2H3 581 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 PHTF2Q8N3S3 785 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 FBXL6Q8N531 539 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 FIBINQ8TAL6 211 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 TBC1D31Q96DN5 1066 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 MAGEB5Q9BZ81 275 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 ZYG11BQ9C0D3 744 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 LACRTQ9GZZ8 138 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 PPARGC1AQ9UBK2 798 aaKnown RBP22.97■■□□□ 1.27
LRRK1-208ENST00000532029 SLC27A6Q9Y2P4 619 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 MYOFQ9NZM1 2061 aa22.97■■□□□ 1.27
LRRK1-208ENST00000532029 IGLV3-10A0A075B6K4 115 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.96■■□□□ 1.27
LRRK1-208ENST00000532029 FAM72CH0Y354 149 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 BUB1O43683 1085 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 CREB3O43889 395 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 GPR37L1O60883 481 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 LRIG2O94898 1065 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 CCDC175P0C221 793 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 CHRNB1P11230 501 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 TCF4P15884 667 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 AOC1P19801 751 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 IL1R2P27930 398 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 SLC1A1P43005 524 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 IRAK1P51617 712 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 SLC25A11Q02978 314 aaKnown RBP22.96■■□□□ 1.27
LRRK1-208ENST00000532029 ZNF177Q13360 481 aaPredicted RBP22.96■■□□□ 1.27
LRRK1-208ENST00000532029 FBXO43Q4G163 708 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 FAM72AQ5TYM5 149 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 FAM72DQ6L9T8 149 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 ANKS1BQ7Z6G8 1248 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 FAM72BQ86X60 149 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 CCDC26Q8TAB7 109 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 TEKT4Q8WW24 435 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 HSPH1Q92598 858 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 ABCB8Q9NUT2 735 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 MPP6Q9NZW5 540 aa22.96■■□□□ 1.27
LRRK1-208ENST00000532029 KIAA1522Q9P206 1035 aaPredicted RBP22.96■■□□□ 1.27
LRRK1-208ENST00000532029 CNTN5O94779 1100 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 GJC1P36383 396 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 OXCT1P55809 520 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 MESP2Q0VG99 397 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 CCINQ13939 588 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 IFI16Q16666 785 aaKnown RBP22.95■■□□□ 1.26
LRRK1-208ENST00000532029 SMTNL2Q2TAL5 461 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 ALFQ53S48 1182 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 KCNT1Q5JUK3 1230 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 MANEALQ5VSG8 457 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 CYP4V2Q6ZWL3 525 aaPredicted RBP22.95■■□□□ 1.26
LRRK1-208ENST00000532029 CPNE8Q86YQ8 564 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 ZNF687Q8N1G0 1237 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 SYNPOQ8N3V7 929 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 WFDC5Q8TCV5 224 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 WFIKKN2Q8TEU8 576 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 TSGA10Q9BZW7 698 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 RBM12Q9NTZ6 932 aaKnown RBP22.95■■□□□ 1.26
LRRK1-208ENST00000532029 GGA2Q9UJY4 613 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 DUSP10Q9Y6W6 482 aa22.95■■□□□ 1.26
LRRK1-208ENST00000532029 KIAA1549LQ6ZVL6 1849 aa22.94■■□□□ 1.26
LRRK1-208ENST00000532029 A0A0A0MRY4 1105 aa22.94■■□□□ 1.26
LRRK1-208ENST00000532029 PRR33A8MZF0 331 aa22.94■■□□□ 1.26
LRRK1-208ENST00000532029 SPOPO43791 374 aa22.94■■□□□ 1.26
LRRK1-208ENST00000532029 BUB1BO60566 1050 aaPredicted RBP22.94■■□□□ 1.26
LRRK1-208ENST00000532029 DCNP07585 359 aaKnown RBP22.94■■□□□ 1.26
LRRK1-208ENST00000532029 RARAP10276 462 aa22.94■■□□□ 1.26
LRRK1-208ENST00000532029 PABPC1P11940 636 aaKnown RBP22.94■■□□□ 1.26
LRRK1-208ENST00000532029 HLA-FP30511 346 aa22.94■■□□□ 1.26
LRRK1-208ENST00000532029 HTR7P34969 479 aa22.94■■□□□ 1.26
LRRK1-208ENST00000532029 TNFRSF4P43489 277 aa22.94■■□□□ 1.26
LRRK1-208ENST00000532029 ZNF135P52742 658 aaPredicted RBP22.94■■□□□ 1.26
LRRK1-208ENST00000532029 TPI1P60174 286 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms