RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 SHBQ15464 509 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 PKDCCQ504Y2 493 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 MPP7Q5T2T1 576 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 NADSYN1Q6IA69 706 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 MSANTD2Q6P1R3 559 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 USP30Q70CQ3 517 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 GANCQ8TET4 914 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 TTC17Q96AE7 1141 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 MRGPRX3Q96LB0 322 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 SPATA32Q96LK8 384 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 PRICKLE1Q96MT3 831 aaPredicted RBP17.99■□□□□ 0.47
PKP3-208ENST00000531857 ACE2Q9BYF1 805 aaPredicted RBP17.99■□□□□ 0.47
PKP3-208ENST00000531857 CNGB3Q9NQW8 809 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 FBXL12Q9NXK8 326 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 INTS6Q9UL03 887 aaKnown RBP17.99■□□□□ 0.47
PKP3-208ENST00000531857 NCKAP1Q9Y2A7 1128 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 A0A1W2PP55 124 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 PLK4O00444 970 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 WNT9AO14904 365 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 MID1O15344 667 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 ACSL4O60488 711 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 EPB41P11171 864 aaKnown RBP17.98■□□□□ 0.47
PKP3-208ENST00000531857 VDRP11473 427 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 C21orf59P57076 290 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 KCNJ12Q14500 433 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 DCAF17Q5H9S7 520 aaPredicted RBP17.98■□□□□ 0.47
PKP3-208ENST00000531857 TCERG1LQ5VWI1 586 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 NCEH1Q6PIU2 408 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 KRBA2Q6ZNG9 492 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 DHX40Q8IX18 779 aaKnown RBP17.98■□□□□ 0.47
PKP3-208ENST00000531857 SCML4Q8N228 414 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 UBR7Q8N806 425 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 ENGASEQ8NFI3 743 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 CLEC4CQ8WTT0 213 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 TFAP2BQ92481 460 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 DCBLD2Q96PD2 775 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 NEUROG2Q9H2A3 272 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 COQ4Q9Y3A0 265 aa17.98■□□□□ 0.47
PKP3-208ENST00000531857 ARID1BQ8NFD5 2236 aaPredicted RBP17.98■□□□□ 0.47
PKP3-208ENST00000531857 CETN3O15182 167 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 DFNA5O60443 496 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 SETSIPP0DME0 302 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 CSKP41240 450 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 SLC11A2P49281 568 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 RPS24P62847 133 aaKnown RBP17.97■□□□□ 0.47
PKP3-208ENST00000531857 LRMPQ12912 555 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 DNAJC3Q13217 504 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 HNRNPA1L2Q32P51 320 aaKnown RBP17.97■□□□□ 0.47
PKP3-208ENST00000531857 C9orf64Q5T6V5 341 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 PMF1Q6P1K2 205 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 MMS22LQ6ZRQ5 1243 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 TMPRSS12Q86WS5 348 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 MFN1Q8IWA4 741 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 FIBINQ8TAL6 211 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 ELF4Q99607 663 aaPredicted RBP17.97■□□□□ 0.47
PKP3-208ENST00000531857 ZSWIM1Q9BR11 485 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 GOLPH3LQ9H4A5 285 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 SCML1Q9UN30 329 aa17.97■□□□□ 0.47
PKP3-208ENST00000531857 C10orf142B7Z368 130 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 ENC1O14682 589 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 IRAK2O43187 625 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 CALCAP01258 141 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 CTSOP43234 321 aaPredicted RBP17.96■□□□□ 0.47
PKP3-208ENST00000531857 TBX4P57082 545 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 ST8SIA6P61647 398 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 CST6Q15828 149 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 INAVAQ3KP66 663 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 FSCBQ5H9T9 825 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 NUGGCQ68CJ6 796 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 LCLAT1Q6UWP7 414 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 MMAAQ8IVH4 418 aaKnown RBP17.96■□□□□ 0.47
PKP3-208ENST00000531857 UNC45BQ8IWX7 931 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 CARNMT1Q8N4J0 409 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 HJURPQ8NCD3 748 aaPredicted RBP17.96■□□□□ 0.47
PKP3-208ENST00000531857 PIP4K2CQ8TBX8 421 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 SLC35F5Q8WV83 523 aa17.96■□□□□ 0.47
PKP3-208ENST00000531857 IRX2Q9BZI1 471 aaPredicted RBP17.96■□□□□ 0.47
PKP3-208ENST00000531857 A0A1W2PR77 199 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 TTC34A8MYJ7 566 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 RNASEH1O60930 286 aaKnown RBP17.95■□□□□ 0.46
PKP3-208ENST00000531857 RNASEH2AO75792 299 aaKnown RBP17.95■□□□□ 0.46
PKP3-208ENST00000531857 LDOC1O95751 146 aaPredicted RBP17.95■□□□□ 0.46
PKP3-208ENST00000531857 LTFP02788 710 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 FYNP06241 537 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 ITPKBP27987 946 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 CFAP52Q8N1V2 620 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 SAP25Q8TEE9 199 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 IRGQQ8WZA9 623 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 AZIN2Q96A70 460 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 CNDP2Q96KP4 475 aaKnown RBP17.95■□□□□ 0.46
PKP3-208ENST00000531857 FCRL2Q96LA5 508 aaPredicted RBP17.95■□□□□ 0.46
PKP3-208ENST00000531857 FAM129BQ96TA1 746 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 NUCKS1Q9H1E3 243 aaKnown RBP17.95■□□□□ 0.46
PKP3-208ENST00000531857 AASDHPPTQ9NRN7 309 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 KIAA1257Q9ULG3 409 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 ERVW-1Q9UQF0 538 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 PCDHGA1Q9Y5H4 931 aa17.95■□□□□ 0.46
PKP3-208ENST00000531857 SETXQ7Z333 2677 aaKnown RBP17.94■□□□□ 0.46
PKP3-208ENST00000531857 EIF4E1BA6NMX2 242 aaKnown RBP17.94■□□□□ 0.46
PKP3-208ENST00000531857 E9PAM4 449 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms