RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 FSCBQ5H9T9 825 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 RAP1GAP2Q684P5 730 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 IL27RAQ6UWB1 636 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 UNQ6494/PRO21346Q6UXR6 183 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 IRF2BP1Q8IU81 584 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 ATP6V0D2Q8N8Y2 350 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 GANCQ8TET4 914 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 PPP1R13BQ96KQ4 1090 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 NOX5Q96PH1 765 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 ADAM33Q9BZ11 813 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 C6orf106Q9H6K1 298 aaPredicted RBP23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 SGK2Q9HBY8 427 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 XPO7Q9UIA9 1087 aaKnown RBP23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 INTS6Q9UL03 887 aaKnown RBP23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 TRIM16O95361 564 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 SEMA4FO95754 770 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 GLI1P08151 1106 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 SLC2A3P11169 496 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 TACR2P21452 398 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 SNX16P57768 344 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 TAF5Q15542 800 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 HNRNPA1L2Q32P51 320 aaKnown RBP23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 PITRM1Q5JRX3 1037 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 EFHC1Q5JVL4 640 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 RNF219Q5W0B1 726 aaPredicted RBP23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 MMS22LQ6ZRQ5 1243 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 KDM1BQ8NB78 822 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 SHC3Q92529 594 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 RNF34Q969K3 372 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 CAMK1GQ96NX5 476 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 RSPH9Q9H1X1 276 aaPredicted RBP23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 MTG2Q9H4K7 406 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 FAM204AQ9H8W3 233 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 SCML1Q9UN30 329 aa23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.05■■□□□ 1.28
TRAPPC4-210ENST00000531290 KCNU1A8MYU2 1149 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 C1QTNF9BB2RNN3 333 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 F5H5T6 163 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 CER1O95813 267 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 IGLV3-25P01717 112 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 C1QTNF9P0C862 333 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 ABCB4P21439 1286 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 KRT9P35527 623 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 MATKP42679 507 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 AFF3P51826 1226 aaKnown RBP23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 FAM193AP78312 1265 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 TRIP6Q15654 476 aaKnown RBP23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 SMYD5Q6GMV2 418 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 PASD1Q8IV76 773 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 FAM114A1Q8IWE2 563 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 DHX40Q8IX18 779 aaKnown RBP23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 WDTC1Q8N5D0 677 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 GBP4Q96PP9 640 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 GAREM1Q9H706 876 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 DDIT4Q9NX09 232 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 PCDHGC3Q9UN70 934 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 ERVW-1Q9UQF0 538 aa23.04■■□□□ 1.28
TRAPPC4-210ENST00000531290 SYNJ2BP-COX16A0A087WUM0 186 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 HYAL3O43820 417 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 SIN3BO75182 1162 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 FSBPO95073 299 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 SRPRAP08240 638 aaKnown RBP23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 CCR1P32246 355 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 ECT2LQ008S8 904 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 TEAD4Q15561 434 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 NAXDQ8IW45 347 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 DEFB106AQ8N104 65 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 C1orf216Q8TAB5 229 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 MYO19Q96H55 970 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 MRGPRX3Q96LB0 322 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 CPXM1Q96SM3 734 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 ASNSD1Q9NWL6 643 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 COX16Q9P0S2 106 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 DNAJC12Q9UKB3 198 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 CACNA1BQ00975 2339 aa23.03■■□□□ 1.28
TRAPPC4-210ENST00000531290 A0A1B0GVT2 93 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 TARSL2A2RTX5 802 aaKnown RBP23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 HSF2BPO75031 334 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 NNMTP40261 264 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 CSNK1EP49674 416 aaKnown RBP23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 PITX1P78337 314 aaPredicted RBP23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 ARID5BQ14865 1188 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 MAN2A1Q16706 1144 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 ZNF423Q2M1K9 1284 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 HLA-BQ31612 363 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 OR6B2Q6IFH4 312 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 C11orf57Q6ZUT1 292 aaPredicted RBP23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 USP30Q70CQ3 517 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 SETD7Q8WTS6 366 aaKnown RBP23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 BIRC7Q96CA5 298 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 SLC2A13Q96QE2 648 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 PABPC3Q9H361 631 aaKnown RBP23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 SYNCQ9H7C4 482 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 FBXL12Q9NXK8 326 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 NEUROG3Q9Y4Z2 214 aa23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 TNRC6BQ9UPQ9 1833 aaKnown RBP23.02■■□□□ 1.28
TRAPPC4-210ENST00000531290 GOLGA6L22H0YM25 854 aa23.01■■□□□ 1.27
TRAPPC4-210ENST00000531290 GRAP2O75791 330 aa23.01■■□□□ 1.27
TRAPPC4-210ENST00000531290 CD27P26842 260 aa23.01■■□□□ 1.27
TRAPPC4-210ENST00000531290 CTSOP43234 321 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms