RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 ADGRF1Q5T601 910 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 C9orf64Q5T6V5 341 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 CCDC73Q6ZRK6 1079 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 ZC3H3Q8IXZ2 948 aaKnown RBP12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 OR14C36Q8NHC7 312 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 MYO19Q96H55 970 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 CCNL2Q96S94 520 aaPredicted RBP12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 DNAI2Q9GZS0 605 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 FAM49BQ9NUQ9 324 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 ARHGAP20Q9P2F6 1191 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 CGNQ9P2M7 1197 aaKnown RBP12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 TBC1D3DA0A087WVF3 549 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 TBC1D3IA0A087WXS9 549 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 TBC1D3EA0A087X179 549 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 TBC1D3KA0A087X1G2 549 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 A0A1B0GVM2 712 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 TBC1D3FA6NER0 549 aaPredicted RBP12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 CDRT15L2A8MXV6 281 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 TBC1D3LB9A6J9 549 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 RNGTTO60942 597 aaKnown RBP12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 SIN3BO75182 1162 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 ADH1BP00325 375 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 C4BPAP04003 597 aaKnown RBP12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 TBC1D3HP0C7X1 549 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 ALPPL2P10696 532 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 ITGB6P18564 788 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 C5AR1P21730 350 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 ADPRHP54922 357 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 TBC1D3GQ6DHY5 549 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 TBC1D3CQ6IPX1 549 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 RSRC2Q7L4I2 434 aaKnown RBP12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 EPM2AIP1Q7L775 607 aaPredicted RBP12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 CLEC14AQ86T13 490 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 TBC1D3Q8IZP1 549 aaPredicted RBP12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 ARL14Q8N4G2 192 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 PRR11Q96HE9 360 aaPredicted RBP12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 FAM129BQ96TA1 746 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 DUSP16Q9BY84 665 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 LRRC27Q9C0I9 530 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 OLA1Q9NTK5 396 aaKnown RBP12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 KLHL11Q9NVR0 708 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 SATB2Q9UPW6 733 aa12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 HBS1LQ9Y450 684 aaKnown RBP12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 SRPRBQ9Y5M8 271 aaKnown RBP12.1□□□□□ -0.47
AMBRA1-207ENST00000529553 ARID1BQ8NFD5 2236 aaPredicted RBP12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 PRAMEF26H0Y7S4 382 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 GJB6O95452 261 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 VNN1O95497 513 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 CYP2J2P51589 502 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 EHHADHQ08426 723 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 INCA1Q0VD86 236 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 CLN3Q13286 438 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 BIRC3Q13489 604 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 SCARA5Q6ZMJ2 495 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 BRAPQ7Z569 592 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 MMAAQ8IVH4 418 aaKnown RBP12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 C12orf56Q8IXR9 622 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 AADATQ8N5Z0 425 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 TPCN2Q8NHX9 752 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 PARD3BQ8TEW8 1205 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 JAKMIP2Q96AA8 810 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 FAM131CQ96AQ9 280 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 KLHDC7BQ96G42 594 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 LMLNQ96KR4 655 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 ARHGAP9Q9BRR9 750 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 DUSP23Q9BVJ7 150 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 NT5C1AQ9BXI3 368 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 MTG2Q9H4K7 406 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 NLGN3Q9NZ94 848 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 CYTH4Q9UIA0 394 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 ATXN7L1Q9ULK2 861 aaPredicted RBP12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 MYH10P35580 1976 aa12.09□□□□□ -0.47
AMBRA1-207ENST00000529553 EDDM13A0A1B0GTR0 161 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 NEMP2A6NFY4 417 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 CLIC2O15247 247 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 IRAK2O43187 625 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 SLC7A4O43246 635 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 EFSO43281 561 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 SDC3O75056 442 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 SRPRAP08240 638 aaKnown RBP12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 GIMD1P0DJR0 217 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 CD70P32970 193 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 YWHAGP61981 247 aaKnown RBP eCLIP12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 PM20D1Q6GTS8 502 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 TMC6Q7Z403 805 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 TRIM69Q86WT6 500 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 FIBINQ8TAL6 211 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 MAPK15Q8TD08 544 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 SGF29Q96ES7 293 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 IFT43Q96FT9 208 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 MRGPRX3Q96LB0 322 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 APOLD1Q96LR9 279 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 OSBPL2Q9H1P3 480 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 CYP3A43Q9HB55 503 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 NCKIPSDQ9NZQ3 722 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 HMGXB4Q9UGU5 601 aa12.08□□□□□ -0.48
AMBRA1-207ENST00000529553 AHCTF1Q8WYP5 2266 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms