RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 TTC39BQ5VTQ0 682 aaPredicted RBP8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 RNF219Q5W0B1 726 aaPredicted RBP8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 OR6B2Q6IFH4 312 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 PSAPL1Q6NUJ1 521 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 DENND1BQ6P3S1 775 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 RFWD3Q6PCD5 774 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 C11orf57Q6ZUT1 292 aaPredicted RBP8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 SND1Q7KZF4 910 aaKnown RBP eCLIP8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 ADIPOR2Q86V24 386 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 CARNMT1Q8N4J0 409 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 TMEM35BQ8NCS4 154 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 MSANTD4Q8NCY6 345 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 C1orf131Q8NDD1 294 aaKnown RBP8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 DQX1Q8TE96 717 aaKnown RBP8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 SHC3Q92529 594 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 SLC39A13Q96H72 371 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 FCRL2Q96LA5 508 aaPredicted RBP8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 HSPA12BQ96MM6 686 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 TUBGCP2Q9BSJ2 902 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 GTPBP2Q9BX10 602 aaKnown RBP8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 GPR174Q9BXC1 333 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 MKRN2Q9H000 416 aaKnown RBP8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 BTBD1Q9H0C5 482 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 TMEM245Q9H330 911 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 NDST4Q9H3R1 872 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 CAPN10Q9HC96 672 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 USP36Q9P275 1121 aaKnown RBP8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 CLEC4EQ9ULY5 219 aa8.11□□□□□ -1.11
CCDC90B-212ENST00000529312 KCNU1A8MYU2 1149 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 E5RJQ4 531 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 F5H5T6 163 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 GOLGA6L22H0YM25 854 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 PES1O00541 588 aaKnown RBP8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 BCAT2O15382 392 aaPredicted RBP8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 PAPSS1O43252 624 aaPredicted RBP8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 DFNA5O60443 496 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 HSF2BPO75031 334 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 EEF1GP26641 437 aaKnown RBP8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 PMLP29590 882 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 NOS2P35228 1153 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 PLK1P53350 603 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 ECT2LQ008S8 904 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 SLC6A3Q01959 620 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 CCDC15Q0P6D6 951 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 SEMA3BQ13214 749 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 ARID5BQ14865 1188 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 FAM133BQ5BKY9 247 aaKnown RBP8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 ZC3H12AQ5D1E8 599 aaKnown RBP8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 SYPL2Q5VXT5 272 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 TMEM215Q68D42 235 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 ZNF776Q68DI1 518 aaPredicted RBP8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 USP30Q70CQ3 517 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 IRF2BP1Q8IU81 584 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 SLC41A1Q8IVJ1 513 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 PLPP6Q8IY26 295 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 LGI2Q8N0V4 545 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 DEFB106AQ8N104 65 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 ANKRD20A12PQ8NF67 263 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 GANCQ8TET4 914 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 CLEC4CQ8WTT0 213 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 SORCS1Q8WY21 1168 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 C18orf8Q96DM3 657 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 CNTNAP3Q9BZ76 1288 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 MIR1-1HGQ9H1L0 117 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 NUP62CLQ9H1M0 184 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 OSGEPQ9NPF4 335 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 PRSS16Q9NQE7 514 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 DNAAF2Q9NVR5 837 aaKnown RBP8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 DAAM1Q9Y4D1 1078 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 NUP205Q92621 2012 aa8.1□□□□□ -1.11
CCDC90B-212ENST00000529312 NCOR2Q9Y618 2525 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 EDDM13A0A1B0GTR0 161 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 LRRC72A6NJI9 287 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 BECN2A8MW95 431 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 LUC7L3O95232 432 aaKnown RBP8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 MOCS2O96007 188 aaPredicted RBP8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 HLA-EP13747 358 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 TACR2P21452 398 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 PRKCHP24723 683 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 SLC6A4P31645 630 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 CD70P32970 193 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 CLCN1P35523 988 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 CSKP41240 450 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 COPAP53621 1224 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 RPS14P62263 151 aaKnown RBP8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 RPS24P62847 133 aaKnown RBP8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 ZNF177Q13360 481 aaPredicted RBP8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 PDCLQ13371 301 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 PTPRNQ16849 979 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 HNRNPA1L2Q32P51 320 aaKnown RBP8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 DCAF12L1Q5VU92 463 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 FAM46CQ5VWP2 391 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 LRRC31Q6UY01 552 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 CLEC17AQ6ZS10 378 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 DSG4Q86SJ6 1040 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 CHSY1Q86X52 802 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 ERICH1Q86X53 443 aa8.09□□□□□ -1.11
CCDC90B-212ENST00000529312 FAM71AQ8IYT1 594 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms