RNA–Protein interactions for RNA: ENST00000528906.5

PSMD13-208, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 858 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-208	ENST00000528906	WBP2	Q969T9	261 aa		13.46	□□□□□ -0.25
PSMD13-208	ENST00000528906	MAGOHB	Q96A72	148 aa	Known RBP	13.46	□□□□□ -0.25
PSMD13-208	ENST00000528906	TMA16	Q96EY4	203 aa	Known RBP	13.46	□□□□□ -0.25
PSMD13-208	ENST00000528906	ASB16	Q96NS5	453 aa		13.46	□□□□□ -0.25
PSMD13-208	ENST00000528906	HERPUD2	Q9BSE4	406 aa		13.46	□□□□□ -0.25
PSMD13-208	ENST00000528906	BRD8	Q9H0E9	1235 aa		13.46	□□□□□ -0.25
PSMD13-208	ENST00000528906	SMG9	Q9H0W8	520 aa	Known RBP	13.46	□□□□□ -0.25
PSMD13-208	ENST00000528906	TMEM248	Q9NWD8	314 aa		13.46	□□□□□ -0.25
PSMD13-208	ENST00000528906	SMARCAL1	Q9NZC9	954 aa		13.46	□□□□□ -0.25
PSMD13-208	ENST00000528906	DRG1	Q9Y295	367 aa	Known RBP	13.46	□□□□□ -0.25
PSMD13-208	ENST00000528906	GREB1	Q4ZG55	1949 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	RIOK3	O14730	519 aa	Known RBP	13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	MCF2L	O15068	1137 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	PHF2	O75151	1096 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	CLDN11	O75508	207 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	PRAMEF12	O95522	483 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	FOSL2	P15408	326 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	MX2	P20592	715 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	GGCX	P38435	758 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	MAPKAPK2	P49137	400 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	FNTA	P49354	379 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	CDH4	P55283	916 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	USP4	Q13107	963 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	XRCC4	Q13426	336 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	ZNF77	Q15935	545 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	MPPE1	Q53F39	396 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	MPP7	Q5T2T1	576 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	NCBP2-AS2	Q69YL0	99 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	CCDC70	Q6NSX1	233 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	C1orf228	Q6PIY5	440 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	CHST9	Q7L1S5	443 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	ZDHHC14	Q8IZN3	488 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	MMGT1	Q8N4V1	131 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	HJURP	Q8NCD3	748 aa	Predicted RBP	13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	ATL2	Q8NHH9	583 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	CCDC26	Q8TAB7	109 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	ACTL9	Q8TC94	416 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	SUSD6	Q92537	303 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	NKD2	Q969F2	451 aa	Predicted RBP	13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	HAUS1	Q96CS2	278 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	ZFP14	Q9HCL3	533 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	RBM12	Q9NTZ6	932 aa	Known RBP	13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	THG1L	Q9NWX6	298 aa	Known RBP	13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	CCL26	Q9Y258	94 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	NR2E1	Q9Y466	385 aa		13.45	□□□□□ -0.26
PSMD13-208	ENST00000528906	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	EFCAB8	A8MWE9	144 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	GFRA2	O00451	464 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	CYBB	P04839	570 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	LAMP2	P13473	410 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	SLC6A4	P31645	630 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	GBP2	P32456	591 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	COIL	P38432	576 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	NDST2	P52849	883 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	OTUD4	Q01804	1114 aa	Known RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	ZNF177	Q13360	481 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	BYSL	Q13895	437 aa	Known RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	PDK1	Q15118	436 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	NOMO1	Q15155	1222 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	SKIV2L	Q15477	1246 aa	Known RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	GLE1	Q53GS7	698 aa	Known RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	ARTN	Q5T4W7	220 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	RFWD3	Q6PCD5	774 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	MAATS1	Q7Z4T9	603 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	NLRP14	Q86W24	1093 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	BBS7	Q8IWZ6	715 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	UMODL1-AS1	Q8N2C9	162 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	ZNF557	Q8N988	423 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	TDRD5	Q8NAT2	981 aa	Known RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	TTC16	Q8NEE8	873 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	SLC35B2	Q8TB61	432 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	BPIFB1	Q8TDL5	484 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	GRK7	Q8WTQ7	553 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	C1orf54	Q8WWF1	131 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	IGSF8	Q969P0	613 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	FERMT1	Q9BQL6	677 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	UBE2Z	Q9H832	354 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	ETNK2	Q9NVF9	386 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	MPP6	Q9NZW5	540 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	NEU3	Q9UQ49	428 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	USP15	Q9Y4E8	981 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906	HEY1	Q9Y5J3	304 aa		13.44	□□□□□ -0.26
PSMD13-208	ENST00000528906		A0A1B0GVM2	712 aa		13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	TCAF2	A6NFQ2	919 aa		13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	HACD1	B0YJ81	288 aa		13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	LIAS	O43766	372 aa		13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	STIP1	P31948	543 aa	Known RBP	13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	VCP	P55072	806 aa	Known RBP	13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	OXCT1	P55809	520 aa		13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	YBEY	P58557	167 aa	Predicted RBP	13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	EIF3E	P60228	445 aa	Known RBP	13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	GBE1	Q04446	702 aa		13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	SMAD4	Q13485	552 aa	Known RBP	13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	CCDC85B	Q15834	202 aa	Predicted RBP	13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	C6orf118	Q5T5N4	469 aa		13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906	POTEH	Q6S545	545 aa		13.43	□□□□□ -0.26
PSMD13-208	ENST00000528906		Q7L0L9	218 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms