RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 EEF2KO00418 725 aaKnown RBP12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 SLC9A3R1O14745 358 aaPredicted RBP12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 CNTN5O94779 1100 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ARSAP15289 507 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 PSMC3P17980 439 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 CHKAP35790 457 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 HCAR3P49019 387 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 TPI1P60174 286 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 RPS24P62847 133 aaKnown RBP12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 EML3Q32P44 896 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 C5orf22Q49AR2 442 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ACBD5Q5T8D3 534 aaPredicted RBP12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 PAPD7Q5XG87 772 aaKnown RBP12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 LRRC31Q6UY01 552 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 RFX8Q6ZV50 586 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 TMEM25Q86YD3 366 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 MAP7D3Q8IWC1 876 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 OTUB2Q96DC9 234 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 RBM41Q96IZ5 413 aaKnown RBP12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 RPRD1AQ96P16 312 aaPredicted RBP12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 EPAS1Q99814 870 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 FAM83CQ9BQN1 747 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 HERPUD2Q9BSE4 406 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 CARD9Q9H257 536 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 THG1LQ9NWX6 298 aaKnown RBP12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 MPP6Q9NZW5 540 aa12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 KIF26AQ9ULI4 1882 aaPredicted RBP12.54□□□□□ -0.4
TRAF3IP2-211ENST00000528599 MYO10Q9HD67 2058 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 KRT10P13645 584 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 AMPD1P23109 780 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 EPHB2P29323 1055 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 HOXC13P31276 330 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ARL4AP40617 200 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 IFNAR2P48551 515 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 AMPD2Q01433 879 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 TNK2Q07912 1038 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ADCY2Q08462 1091 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 DPYSQ14117 519 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ALFQ53S48 1182 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ODF2Q5BJF6 829 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ANKRD20A8PQ5CZ79 823 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 RWDD4Q6NW29 188 aaKnown RBP12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 RHBDF2Q6PJF5 856 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 TPGS1Q6ZTW0 290 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 CIR1Q86X95 450 aaPredicted RBP12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 CCDC50Q8IVM0 306 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 YAF2Q8IY57 180 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 PCDH19Q8TAB3 1148 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 COG1Q8WTW3 980 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 DEPDC1BQ8WUY9 529 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 IRF7Q92985 503 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 BHMTQ93088 406 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 FAF2Q96CS3 445 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 TBC1D31Q96DN5 1066 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 RNF157Q96PX1 679 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 OSBPL9Q96SU4 736 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ZNF670Q9BS34 389 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 KCNK12Q9HB15 430 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ARHGEF4Q9NR80 690 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 SPHK2Q9NRA0 654 aa12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 RCOR3Q9P2K3 495 aaPredicted RBP12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 PPARGC1AQ9UBK2 798 aaKnown RBP12.53□□□□□ -0.4
TRAF3IP2-211ENST00000528599 hCG_1818297A0A087WSY0 165 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 OTOL1A6NHN0 477 aaPredicted RBP12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ZNF487B1APH4 448 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ASGR2P07307 311 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 GDI1P31150 447 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 HTR7P34969 479 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ZNF135P52742 658 aaPredicted RBP12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 COPS2P61201 443 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 PDGFRLQ15198 375 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 TFDP3Q5H9I0 405 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 RABGAP1LQ5R372 815 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 LY6G5CQ5SRR4 150 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 VSIG1Q86XK7 387 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 RNF135Q8IUD6 432 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 PQLC3Q8N755 202 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ZNF592Q92610 1267 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 TMA16Q96EY4 203 aaKnown RBP12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 TRMT61BQ9BVS5 477 aaKnown RBP12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 HEMGNQ9BXL5 484 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 OSBPL8Q9BZF1 889 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ZYG11BQ9C0D3 744 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 EBF3Q9H4W6 596 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 HPS4Q9NQG7 708 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ETNK2Q9NVF9 386 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 PLK2Q9NYY3 685 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 STIM2Q9P246 746 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ZNF212Q9UDV6 495 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 MUTYHQ9UIF7 546 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 MFHAS1Q9Y4C4 1052 aa12.52□□□□□ -0.4
TRAF3IP2-211ENST00000528599 ZNF185O15231 689 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CHADO15335 359 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 DAPK3O43293 454 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CEP104O60308 925 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TBL1XO60907 577 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CYP17A1P05093 508 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 PRLRP16471 622 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ERCC2P18074 760 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms