RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 JOSD2Q8TAC2 188 aa11.42□□□□□ -0.58
CCDC84-205ENST00000528088 RXFP2Q8WXD0 754 aa11.42□□□□□ -0.58
CCDC84-205ENST00000528088 CTNNBL1Q8WYA6 563 aaPredicted RBP11.42□□□□□ -0.58
CCDC84-205ENST00000528088 EXOC4Q96A65 974 aa11.42□□□□□ -0.58
CCDC84-205ENST00000528088 OTUB2Q96DC9 234 aa11.42□□□□□ -0.58
CCDC84-205ENST00000528088 TBCBQ99426 244 aa11.42□□□□□ -0.58
CCDC84-205ENST00000528088 DDX50Q9BQ39 737 aaKnown RBP11.42□□□□□ -0.58
CCDC84-205ENST00000528088 C8orf33Q9H7E9 229 aaPredicted RBP11.42□□□□□ -0.58
CCDC84-205ENST00000528088 ECT2Q9H8V3 914 aa11.42□□□□□ -0.58
CCDC84-205ENST00000528088 MRPL47Q9HD33 250 aaKnown RBP11.42□□□□□ -0.58
CCDC84-205ENST00000528088 HPS4Q9NQG7 708 aa11.42□□□□□ -0.58
CCDC84-205ENST00000528088 SPTLC3Q9NUV7 552 aa11.42□□□□□ -0.58
CCDC84-205ENST00000528088 IMPACTQ9P2X3 320 aa11.42□□□□□ -0.58
CCDC84-205ENST00000528088 COL4A2P08572 1712 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 TYW5A2RUC4 315 aaKnown RBP11.41□□□□□ -0.58
CCDC84-205ENST00000528088 SIGLEC16A6NMB1 481 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 NEDD8-MDP1E9PL57 170 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 SLC2A3P11169 496 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 ADH5P11766 374 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 CCR1P32246 355 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 RFC1P35251 1148 aaPredicted RBP11.41□□□□□ -0.58
CCDC84-205ENST00000528088 CYLC1P35663 651 aaPredicted RBP11.41□□□□□ -0.58
CCDC84-205ENST00000528088 CHKAP35790 457 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 EIF1AXP47813 144 aaKnown RBP11.41□□□□□ -0.58
CCDC84-205ENST00000528088 RING1Q06587 406 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 NNTQ13423 1086 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 DHCR24Q15392 516 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 SLC25A52Q3SY17 297 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 LY6G5CQ5SRR4 150 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 KIAA1958Q8N8K9 716 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 ATP6V0D2Q8N8Y2 350 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 CLDN23Q96B33 292 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 PANX2Q96RD6 677 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 BBS2Q9BXC9 721 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 OSBPL6Q9BZF3 934 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 ISCUQ9H1K1 167 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 TRPV5Q9NQA5 729 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 SPATA6Q9NWH7 488 aaPredicted RBP11.41□□□□□ -0.58
CCDC84-205ENST00000528088 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC84-205ENST00000528088 TMEM59LQ9UK28 342 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 AGO1Q9UL18 857 aaKnown RBP11.41□□□□□ -0.58
CCDC84-205ENST00000528088 VPS13AQ96RL7 3174 aa11.41□□□□□ -0.58
CCDC84-205ENST00000528088 SPECC1L-ADORA2AF8WAN1 911 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 MAN2B1O00754 1011 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 TRDMT1O14717 391 aaKnown RBP11.4□□□□□ -0.58
CCDC84-205ENST00000528088 FZD6O60353 706 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 TSPAN3O60637 253 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 F9P00740 461 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 KLKB1P03952 638 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 CYP17A1P05093 508 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 H2AFZP0C0S5 128 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 PSMA2P25787 234 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 RDXP35241 583 aaKnown RBP11.4□□□□□ -0.58
CCDC84-205ENST00000528088 GALCP54803 685 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 GSCP56915 257 aaPredicted RBP11.4□□□□□ -0.58
CCDC84-205ENST00000528088 RPL7AP62424 266 aaKnown RBP11.4□□□□□ -0.58
CCDC84-205ENST00000528088 GAD2Q05329 585 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 TLR1Q15399 786 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 SPA17Q15506 151 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 C15orf59Q2T9L4 293 aaPredicted RBP11.4□□□□□ -0.58
CCDC84-205ENST00000528088 TXNDC11Q6PKC3 985 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 TSSK4Q6SA08 328 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 H2AFVQ71UI9 128 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 RALGPS2Q86X27 583 aaPredicted RBP11.4□□□□□ -0.58
CCDC84-205ENST00000528088 CHSY1Q86X52 802 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 NAT16Q8N8M0 369 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 OLIG1Q8TAK6 271 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 DDI1Q8WTU0 396 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 FAM3CQ92520 227 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 MSANTD3Q96H12 275 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 FCRL2Q96LA5 508 aaPredicted RBP11.4□□□□□ -0.58
CCDC84-205ENST00000528088 NPY6RQ99463 290 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 THAP2Q9H0W7 228 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 WDCPQ9H6R7 721 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 LUC7LQ9NQ29 371 aaKnown RBP11.4□□□□□ -0.58
CCDC84-205ENST00000528088 SPHK2Q9NRA0 654 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 PIGVQ9NUD9 493 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 STIM2Q9P246 746 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 MRPS17Q9Y2R5 130 aaKnown RBP11.4□□□□□ -0.58
CCDC84-205ENST00000528088 ATG2BQ96BY7 2078 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 FAM186AA6NE01 2351 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 GPR179Q6PRD1 2367 aa11.4□□□□□ -0.58
CCDC84-205ENST00000528088 OTOL1A6NHN0 477 aaPredicted RBP11.39□□□□□ -0.59
CCDC84-205ENST00000528088 C2CD4BA6NLJ0 364 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 CDK2AP1O14519 115 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 ACSL4O60488 711 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 TFE3P19532 575 aaPredicted RBP11.39□□□□□ -0.59
CCDC84-205ENST00000528088 VAMP1P23763 118 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 GJA4P35212 333 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 SLC19A1P41440 591 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 GSDMDP57764 484 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 CSTF1Q05048 431 aaKnown RBP11.39□□□□□ -0.59
CCDC84-205ENST00000528088 MTAPQ13126 283 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 MAMLD1Q13495 774 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 GAS6Q14393 721 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 PON2Q15165 354 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 ARL13BQ3SXY8 428 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 SH3PXD2AQ5TCZ1 1133 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 RAP1GAP2Q684P5 730 aa11.39□□□□□ -0.59
CCDC84-205ENST00000528088 TRNP1Q6NT89 227 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms