RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PENKP01210 267 aaPredicted RBP10.97□□□□□ -0.65
CPSF1-203ENST00000527916 CYBBP04839 570 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 ITGAVP06756 1048 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 ACSL1P33121 698 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 TKTL1P51854 596 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 UCNP55089 124 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 UBE2HP62256 183 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 ZBTB16Q05516 673 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 PDE4CQ08493 712 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 CCDC173Q0VFZ6 552 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 BST2Q10589 180 aaKnown RBP10.97□□□□□ -0.65
CPSF1-203ENST00000527916 PAK1Q13153 545 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 STILQ15468 1287 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 CNGA2Q16280 664 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 PKDCCQ504Y2 493 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 HES3Q5TGS1 186 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 BROXQ5VW32 411 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 KLHL10Q6JEL2 608 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 LCLAT1Q6UWP7 414 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 TRIM59Q8IWR1 403 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 BIRC7Q96CA5 298 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 FBRSQ9HAH7 460 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 OLA1Q9NTK5 396 aaKnown RBP10.97□□□□□ -0.65
CPSF1-203ENST00000527916 KIAA1468Q9P260 1216 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 NUDT5Q9UKK9 219 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 TSPAN16Q9UKR8 245 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 SLCO1B1Q9Y6L6 691 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 COL5A1P20908 1838 aaPredicted RBP10.97□□□□□ -0.65
CPSF1-203ENST00000527916 MYLKQ15746 1914 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 O00370 1275 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 VILLO15195 856 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 YKT6O15498 198 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 BRINP1O60477 761 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 TSPAN3O60637 253 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 KLKB1P03952 638 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 SETSIPP0DME0 302 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 PRKCHP24723 683 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 YWHAGP61981 247 aaKnown RBP eCLIP10.96□□□□□ -0.65
CPSF1-203ENST00000527916 RACK1P63244 317 aaKnown RBP10.96□□□□□ -0.65
CPSF1-203ENST00000527916 GCNT1Q02742 428 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 KCNH2Q12809 1159 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 ILKQ13418 452 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 CAMK2GQ13555 558 aaPredicted RBP10.96□□□□□ -0.65
CPSF1-203ENST00000527916 GOLGA7BQ2TAP0 167 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 TTC31Q49AM3 519 aaPredicted RBP10.96□□□□□ -0.65
CPSF1-203ENST00000527916 SMYD5Q6GMV2 418 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 FBXL19Q6PCT2 694 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 LAYNQ6UX15 382 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 BHLHA9Q7RTU4 235 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 SPACA3Q8IXA5 215 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 EHBP1Q8NDI1 1231 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 SLC35F5Q8WV83 523 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 LGMNQ99538 433 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 ELF4Q99607 663 aaPredicted RBP10.96□□□□□ -0.65
CPSF1-203ENST00000527916 SLC2A11Q9BYW1 496 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 LRRC4Q9HBW1 653 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 SGK2Q9HBY8 427 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 CNGB3Q9NQW8 809 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 CHMP5Q9NZZ3 219 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 STRIP2Q9ULQ0 834 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 PLA2G4CQ9UP65 541 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 CNTN6Q9UQ52 1028 aa10.96□□□□□ -0.65
CPSF1-203ENST00000527916 B8ZZF3 427 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 RNF225M0QZC1 329 aaPredicted RBP10.95□□□□□ -0.66
CPSF1-203ENST00000527916 TULP2O00295 520 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 BIN1O00499 593 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 MDM4O15151 490 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 AFPP02771 609 aaKnown RBP10.95□□□□□ -0.66
CPSF1-203ENST00000527916 DNTTP04053 509 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 CD19P15391 556 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 ARRB1P49407 418 aaPredicted RBP10.95□□□□□ -0.66
CPSF1-203ENST00000527916 ACADVLP49748 655 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 CLDN6P56747 220 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 TMPRSS3P57727 454 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 LRMPQ12912 555 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 DNAJC3Q13217 504 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 TRIP4Q15650 581 aaPredicted RBP10.95□□□□□ -0.66
CPSF1-203ENST00000527916 TBC1D25Q3MII6 688 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 KCNT1Q5JUK3 1230 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 FYB2Q5VWT5 728 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 TMEM270Q6UE05 265 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 PCSK4Q6UW60 755 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 RSRC2Q7L4I2 434 aaKnown RBP10.95□□□□□ -0.66
CPSF1-203ENST00000527916 GATAD2AQ86YP4 633 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 FAM217AQ8IXS0 508 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 CACTIN-AS1Q8N1I8 211 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 PPM1KQ8N3J5 372 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 CPXM2Q8N436 756 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 FAM181AQ8N9Y4 354 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 ZNF248Q8NDW4 579 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 IRGQQ8WZA9 623 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 TFAP2BQ92481 460 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 GOLGA1Q92805 767 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 PIWIL1Q96J94 861 aaKnown RBP10.95□□□□□ -0.66
CPSF1-203ENST00000527916 HSFY1Q96LI6 401 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 SRRTQ9BXP5 876 aaKnown RBP10.95□□□□□ -0.66
CPSF1-203ENST00000527916 ULBP1Q9BZM6 244 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 ABCC13Q9NSE7 274 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 MARCH2Q9P0N8 246 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 RWDD2AQ9UIY3 292 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms