RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 GOLGA8RI6L899 631 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 SYN3O14994 580 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 SPAG6O75602 509 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 COL6A1P12109 1028 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 RPA3P35244 121 aaPredicted RBP17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 WDR4P57081 412 aaKnown RBP17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 CRADDP78560 199 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 PID1Q7Z2X4 250 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 ELAC1Q9H777 363 aaKnown RBP17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 XAB2Q9HCS7 855 aaKnown RBP17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 MARCH5Q9NX47 278 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 SENP1Q9P0U3 644 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 KLHL8Q9P2G9 620 aaPredicted RBP17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 IKBKGQ9Y6K9 419 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 TTC3P53804 2025 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 FAM155BO75949 473 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 CA4P22748 312 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 PTPN3P26045 913 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 SLC11A1P49279 550 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 CCL23P55773 120 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 USP46P62068 366 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 IL9RQ01113 521 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 SPARCL1Q14515 664 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 NFE2Q16621 373 aaPredicted RBP17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 CYB5D1Q6P9G0 228 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 BEND5Q7L4P6 421 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 SPATA21Q7Z572 469 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 PPM1NQ8N819 430 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 TET1Q8NFU7 2136 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 MZB1Q8WU39 189 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 SLC44A1Q8WWI5 657 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 EBNA1BP2Q99848 306 aaKnown RBP17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 SMOC2Q9H3U7 446 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 PCDHB5Q9Y5E4 795 aa17.76■□□□□ 0.43
PCDHA6-202ENST00000527624 MYO18AQ92614 2054 aaKnown RBP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 CXorf49A8MYA2 514 aaPredicted RBP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 PRPF4O43172 522 aaKnown RBP eCLIP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 PAGE1O75459 146 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 MOCS2O96007 188 aaPredicted RBP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 INHBAP08476 426 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 TAC1P20366 129 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 SLC18A1P54219 525 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 SESN2P58004 480 aaPredicted RBP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 CBLBQ13191 982 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 EIF4EBP2Q13542 120 aaPredicted RBP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 ZKSCAN8Q15776 578 aaPredicted RBP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 LRRC39Q96DD0 335 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 ARHGEF38Q9NXL2 777 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 PRKAG3Q9UGI9 489 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 SMG5Q9UPR3 1016 aaKnown RBP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 ARL2BPQ9Y2Y0 163 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 COL4A4P53420 1690 aaPredicted RBP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 ASMTLO95671 621 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 C1QAP02745 245 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 ALDH2P05091 517 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 FOXN2P32314 431 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 MNAT1P51948 309 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 SARNPP82979 210 aaKnown RBP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 PPIDQ08752 370 aaKnown RBP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 FAAP100Q0VG06 881 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 OLIG2Q13516 323 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 PARP6Q2NL67 630 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 CASC4Q6P4E1 433 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 TRMT10BQ6PF06 316 aaKnown RBP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 TMEM173Q86WV6 379 aaPredicted RBP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 NUP93Q8N1F7 819 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 DENND1AQ8TEH3 1009 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 FUBP3Q96I24 572 aaKnown RBP eCLIP17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 PLCD4Q9BRC7 762 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 SLC27A5Q9Y2P5 690 aa17.75■□□□□ 0.43
PCDHA6-202ENST00000527624 WDR27A2RRH5 827 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 TBKBP1A7MCY6 615 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 TYROBPO43914 113 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 APOEP02649 317 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 CPB1P15086 417 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 CCR1P32246 355 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 GARSP41250 739 aaKnown RBP17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 GALNT2Q10471 571 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 FAM133BQ5BKY9 247 aaKnown RBP17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 ZNF280DQ6N043 979 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 CGB2Q6NT52 195 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 AGAP3Q96P47 875 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 PPP1R12CQ9BZL4 782 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 OSBPL2Q9H1P3 480 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 SMYD2Q9NRG4 433 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 GMIPQ9P107 970 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 NEU3Q9UQ49 428 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 RAD54BQ9Y620 910 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 PATJQ8NI35 1801 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 NCAM2O15394 837 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 UGT1A9O60656 530 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 UBOX5O94941 541 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 SERPINB6P35237 376 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 ZBTB17Q13105 803 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 SLC1A5Q15758 541 aa17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 RSPO2Q6UXX9 243 aaPredicted RBP17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 GBP7Q8N8V2 638 aaPredicted RBP17.74■□□□□ 0.43
PCDHA6-202ENST00000527624 FCRL2Q96LA5 508 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms