RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 PRKCIP41743 596 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 ZNF177Q13360 481 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-209ENST00000527469 EIF4EBP2Q13542 120 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-209ENST00000527469 ZNF234Q14588 700 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 ELF2Q15723 593 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 OTUD1Q5VV17 481 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-209ENST00000527469 MBLAC2Q68D91 279 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 FBXL22Q6P050 247 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 ZNF571Q7Z3V5 609 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-209ENST00000527469 C11orf74Q86VG3 221 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 FAM131BQ86XD5 332 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 MCOLN2Q8IZK6 566 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.82□□□□□ -0.2
CAPN1-209ENST00000527469 MDGA1Q8NFP4 955 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 SORCS1Q8WY21 1168 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 RUBCNQ92622 972 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 SYN2Q92777 582 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-209ENST00000527469 NT5C3BQ969T7 300 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 TRIM11Q96F44 468 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 VCPIP1Q96JH7 1222 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 MCEEQ96PE7 176 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 PPP1R9BQ96SB3 815 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 GABRG3Q99928 467 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 THAP10Q9P2Z0 257 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-209ENST00000527469 CAPN11Q9UMQ6 739 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 RAD54BQ9Y620 910 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 HS3ST4Q9Y661 456 aa13.82□□□□□ -0.2
CAPN1-209ENST00000527469 MYO18AQ92614 2054 aaKnown RBP13.82□□□□□ -0.2
CAPN1-209ENST00000527469 VPS13AQ96RL7 3174 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 ZNF292O60281 2723 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 C2CD4BA6NLJ0 364 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 SIGLEC16A6NMB1 481 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 ASLP04424 464 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 SERPING1P05155 500 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 EPHX1P07099 455 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 DLDP09622 509 aaKnown RBP13.81□□□□□ -0.2
CAPN1-209ENST00000527469 RRM1P23921 792 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 RFC1P35251 1148 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-209ENST00000527469 GGCXP38435 758 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 IL12RB1P42701 662 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 PTPN9P43378 593 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 GSCP56915 257 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-209ENST00000527469 LMAN2Q12907 356 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 PTP4A2Q12974 167 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 TRIM14Q14142 442 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 C15orf59Q2T9L4 293 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-209ENST00000527469 SPECC1LQ69YQ0 1117 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 LAIR1Q6GTX8 287 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 RASSF3Q86WH2 238 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 CIR1Q86X95 450 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-209ENST00000527469 CCAR2Q8N163 923 aaKnown RBP13.81□□□□□ -0.2
CAPN1-209ENST00000527469 SUMF1Q8NBK3 374 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 JOSD2Q8TAC2 188 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 FAM172AQ8WUF8 416 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 CYB5D2Q8WUJ1 264 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 MYEOVQ96EZ4 313 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 PRMT1Q99873 361 aaKnown RBP13.81□□□□□ -0.2
CAPN1-209ENST00000527469 PARVAQ9NVD7 372 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 ZNHIT6Q9NWK9 470 aaKnown RBP13.81□□□□□ -0.2
CAPN1-209ENST00000527469 ARHGEF38Q9NXL2 777 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 CALCOCO1Q9P1Z2 691 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 INVSQ9Y283 1065 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 ITIH6Q6UXX5 1313 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 FANCMQ8IYD8 2048 aa13.81□□□□□ -0.2
CAPN1-209ENST00000527469 OTOGLQ3ZCN5 2332 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 WASH3PC4AMC7 463 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 SRGAP2O75044 1071 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 RTN2O75298 545 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 CLDN11O75508 207 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 RHOBTB1O94844 696 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 FTLP02792 175 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-209ENST00000527469 GYPCP04921 128 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 CHRM1P11229 460 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-209ENST00000527469 GZMAP12544 262 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 CASP14P31944 242 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 NNMTP40261 264 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 CSKP41240 450 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 ATXN1P54253 815 aaKnown RBP13.8□□□□□ -0.2
CAPN1-209ENST00000527469 SLC12A1Q13621 1099 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 FUT11Q495W5 492 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 CCDC14Q49A88 953 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 PITRM1Q5JRX3 1037 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 E4F1Q66K89 784 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-209ENST00000527469 TMEM215Q68D42 235 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 RNF43Q68DV7 783 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 TRNP1Q6NT89 227 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 SCYL2Q6P3W7 929 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 WDR59Q6PJI9 974 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 KIAA1324Q6UXG2 1013 aaKnown RBP13.8□□□□□ -0.2
CAPN1-209ENST00000527469 STRADAQ7RTN6 431 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 ADIPOR2Q86V24 386 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 WFDC5Q8TCV5 224 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 ZNF653Q96CK0 615 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 HAPLN3Q96S86 360 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 TAS2R14Q9NYV8 317 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 HCN2Q9UL51 889 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 SCINQ9Y6U3 715 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 MYO15AQ9UKN7 3530 aa13.8□□□□□ -0.2
CAPN1-209ENST00000527469 A0A1W2PQF6 199 aa13.79□□□□□ -0.2
CAPN1-209ENST00000527469 MYBL1P10243 752 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms