RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 DCDC2Q9UHG0 476 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 TSPAN16Q9UKR8 245 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 SLC4A7Q9Y6M7 1214 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 EYSQ5T1H1 3165 aa12.83□□□□□ -0.35
CAPN1-208ENST00000527323 LACTBL1A8MY62 500 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 E9PBE3 544 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 KLHL41O60662 606 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 RALBP11234 206 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 P4HA1P13674 534 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 CNTFP26441 200 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 GMPRP36959 345 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 NDST1P52848 882 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 FOLH1Q04609 750 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 TTLL4Q14679 1199 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 FAM110CQ1W6H9 321 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 HEATR6Q6AI08 1181 aaKnown RBP12.83□□□□□ -0.36
CAPN1-208ENST00000527323 TIFABQ6ZNK6 161 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 SDCCAG8Q86SQ7 713 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-208ENST00000527323 SCUBE3Q8IX30 993 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 PHTF2Q8N3S3 785 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 C12orf29Q8N999 325 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 ZNF784Q8NCA9 323 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-208ENST00000527323 ACTRT2Q8TDY3 377 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 NAT14Q8WUY8 206 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 UBE2OQ9C0C9 1292 aaKnown RBP12.83□□□□□ -0.36
CAPN1-208ENST00000527323 ZDHHC7Q9NXF8 308 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 EMCNQ9ULC0 261 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 DTNAQ9Y4J8 743 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 MYADML2A6NDP7 307 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 CREB3O43889 395 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 OR6B1O95007 311 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 ALDOAP04075 364 aaKnown RBP12.83□□□□□ -0.36
CAPN1-208ENST00000527323 CHN2P52757 468 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 SLC5A9Q2M3M2 681 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 JADE1Q6IE81 842 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 PACS1Q6VY07 963 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 FRMD7Q6ZUT3 714 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 ZNF534Q76KX8 674 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 SPATA24Q86W54 205 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 FBXW8Q8N3Y1 598 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 ATXN7L3BQ96GX2 97 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 HPDLQ96IR7 371 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 CAPNS2Q96L46 248 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 C2orf40Q9H1Z8 148 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 FAM96AQ9H5X1 160 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 STN1Q9H668 368 aaKnown RBP12.83□□□□□ -0.36
CAPN1-208ENST00000527323 IRAK4Q9NWZ3 460 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 ARHGAP26Q9UNA1 814 aa12.83□□□□□ -0.36
CAPN1-208ENST00000527323 CAPN8A6NHC0 703 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 GSRP00390 522 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 SLC10A3P09131 477 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 INSRRP14616 1297 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 ITGAXP20702 1163 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 GRK2P25098 689 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 FLT3LGP49771 235 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 ABCE1P61221 599 aaKnown RBP12.82□□□□□ -0.36
CAPN1-208ENST00000527323 FKBP1BP68106 108 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 PRKCZQ05513 592 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 USP4Q13107 963 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 CES3Q6UWW8 571 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 C4orf22Q6V702 233 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 TFB1MQ8WVM0 346 aaKnown RBP12.82□□□□□ -0.36
CAPN1-208ENST00000527323 DTNBP1Q96EV8 351 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 HIC2Q96JB3 615 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 MAGEB5Q9BZ81 275 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 MOCS1Q9NZB8 636 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 TMEM216Q9P0N5 145 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 INPP5FQ9Y2H2 1132 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 ACKR2O00590 384 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 AIM2O14862 343 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 HSPA4LO95757 839 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 PABPC4LP0CB38 370 aaKnown RBP12.82□□□□□ -0.36
CAPN1-208ENST00000527323 VAV1P15498 845 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 GRIA2P42262 883 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 ARHGAP1Q07960 439 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 PCLAFQ15004 111 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 ANKRD20A4Q4UJ75 823 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 FSCBQ5H9T9 825 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 SLC9A4Q6AI14 798 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 PGM2L1Q6PCE3 622 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 MAMDC4Q6UXC1 1216 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 MAVSQ7Z434 540 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 OR6J1Q8NGC5 347 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 ACMSDQ8TDX5 336 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 KCNK16Q96T55 309 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 CDT1Q9H211 546 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 ZNF358Q9NW07 568 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 GCATO75600 419 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 IL18RAPO95256 599 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 COX4I1P13073 169 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 CPA3P15088 417 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 TPSB2P20231 275 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 MGAT1P26572 445 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 ICAM3P32942 547 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 MAGEA6P43360 314 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 SLC10A2Q12908 348 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-208ENST00000527323 LSAMPQ13449 338 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 TPSAB1Q15661 275 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 GOLGA7BQ2TAP0 167 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 TSHZ1Q6ZSZ6 1077 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms