RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-208	ENST00000527265	DNAJB9	Q9UBS3	223 aa		4.09	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ZNF70	Q9UC06	446 aa	Predicted RBP	4.09	□□□□□ -1.75
CLNS1A-208	ENST00000527265	MOSPD1	Q9UJG1	213 aa		4.09	□□□□□ -1.75
CLNS1A-208	ENST00000527265	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.09	□□□□□ -1.75
CLNS1A-208	ENST00000527265	VWA7	Q9Y334	891 aa		4.09	□□□□□ -1.75
CLNS1A-208	ENST00000527265	CDY1	Q9Y6F8	540 aa		4.09	□□□□□ -1.75
CLNS1A-208	ENST00000527265	KCNE2	Q9Y6J6	123 aa		4.09	□□□□□ -1.75
CLNS1A-208	ENST00000527265	ARHGAP10	A1A4S6	786 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	SLC38A8	A6NNN8	435 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	TMEM232	C9JQI7	657 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	MPHOSPH10	O00566	681 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	ZSCAN9	O15535	394 aa	Predicted RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	SEPT4	O43236	478 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	LARGE1	O95461	756 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	SNRNP70	P08621	437 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	WEE2	P0C1S8	567 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	ZNF888	P0CJ79	500 aa	Predicted RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	KRT10	P13645	584 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	KCNA2	P16389	499 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	PRKCH	P24723	683 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	PBX3	P40426	434 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	VIPR2	P41587	438 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	CAPZA2	P47755	286 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	ZNF132	P52740	706 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	RRAD	P55042	308 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	TPD52	P55327	224 aa	Predicted RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	POLR2F	P61218	127 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	RPL7A	P62424	266 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	TBL3	Q12788	808 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	DUSP8	Q13202	625 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	SLC14A1	Q13336	389 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	SEMA3A	Q14563	771 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	PCOLCE	Q15113	449 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	PPP2R5B	Q15173	497 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	AMOT	Q4VCS5	1084 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	CBWD5	Q5RIA9	395 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	MEX3C	Q5U5Q3	659 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	TRABD2A	Q86V40	505 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	METTL23	Q86XA0	190 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	FSIP1	Q8NA03	581 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	POGLUT1	Q8NBL1	392 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	MDM1	Q8TC05	714 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	ZNF483	Q8TF39	744 aa	Predicted RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	TAF4B	Q92750	862 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	GFM2	Q969S9	779 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	EXOC4	Q96A65	974 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	SLC22A18	Q96BI1	424 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	RMDN1	Q96DB5	314 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	SIPA1	Q96FS4	1042 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	FAM89A	Q96GI7	184 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	AJUBA	Q96IF1	538 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	TMEM237	Q96Q45	408 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	HTATIP2	Q9BUP3	242 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	THUMPD3	Q9BV44	507 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	CARD11	Q9BXL7	1154 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	SLC46A2	Q9BY10	475 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	LTB4R2	Q9NPC1	389 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	SNX15	Q9NRS6	342 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	LIN7C	Q9NUP9	197 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	TMLHE	Q9NVH6	421 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	MRPS18A	Q9NVS2	196 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	BEX4	Q9NWD9	120 aa	Predicted RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	ING3	Q9NXR8	418 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	KCND2	Q9NZV8	630 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	POGK	Q9P215	609 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	CPSF2	Q9P2I0	782 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	SLCO3A1	Q9UIG8	710 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	FAM184B	Q9ULE4	1060 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	NFU1	Q9UMS0	254 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	COG5	Q9UP83	839 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	RCE1	Q9Y256	329 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	RRP15	Q9Y3B9	282 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	NEU2	Q9Y3R4	380 aa		4.08	□□□□□ -1.76
CLNS1A-208	ENST00000527265	BICRA	Q9NZM4	1560 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	ERCC6	Q03468	1493 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	C2orf78	A6NCI8	922 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	URAD	A6NGE7	173 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	GLOD5	A6NK44	160 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	MYO1G	B0I1T2	1018 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	PLOD2	O00469	737 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	CAPN9	O14815	690 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	HEXIM1	O94992	359 aa	Known RBP	4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	KIF20A	O95235	890 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	RASAL1	O95294	804 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	GUCA1C	O95843	209 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	LMNA	P02545	664 aa	Known RBP	4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	ERBB2	P04626	1255 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	MYBL1	P10243	752 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	PC	P11498	1178 aa	Known RBP	4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	CYP2C9	P11712	490 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	XRCC6	P12956	609 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	GYPE	P15421	78 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	HLA-DPA1	P20036	260 aa		4.07	□□□□□ -1.76
CLNS1A-208	ENST00000527265	BMP5	P22003	454 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms