RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 MIPP30301 263 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 PCK1P35558 622 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 GGCXP38435 758 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 MAGEA9P43362 315 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 TNFRSF4P43489 277 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 KDSRQ06136 332 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 LRRC31Q6UY01 552 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 NUDT18Q6ZVK8 323 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 ZNF557Q8N988 423 aaPredicted RBP13.35□□□□□ -0.27
SMPD1-202ENST00000526280 FIBINQ8TAL6 211 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 RFFLQ8WZ73 363 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 RPRD1AQ96P16 312 aaPredicted RBP13.35□□□□□ -0.27
SMPD1-202ENST00000526280 MAGEB5Q9BZ81 275 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 LUC7LQ9NQ29 371 aaKnown RBP13.35□□□□□ -0.27
SMPD1-202ENST00000526280 LCMT1Q9UIC8 334 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 FZD10Q9ULW2 581 aa13.35□□□□□ -0.27
SMPD1-202ENST00000526280 REXO2Q9Y3B8 237 aaKnown RBP13.35□□□□□ -0.27
SMPD1-202ENST00000526280 ATG2BQ96BY7 2078 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 A0A1B0GVM2 712 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 TCAF2A6NFQ2 919 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 E9PAM4 449 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 ZNF500O60304 480 aaPredicted RBP13.34□□□□□ -0.27
SMPD1-202ENST00000526280 SRGAP2O75044 1071 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 LUC7L3O95232 432 aaKnown RBP13.34□□□□□ -0.27
SMPD1-202ENST00000526280 HLA-FP30511 346 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 IRAK1P51617 712 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 EFHC2Q5JST6 749 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 ERMARDQ5T6L9 678 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 MANEALQ5VSG8 457 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 DAB2IPQ5VWQ8 1189 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 CYP4V2Q6ZWL3 525 aaPredicted RBP13.34□□□□□ -0.27
SMPD1-202ENST00000526280 KIAA0907Q7Z7F0 614 aaPredicted RBP13.34□□□□□ -0.27
SMPD1-202ENST00000526280 CIR1Q86X95 450 aaPredicted RBP13.34□□□□□ -0.27
SMPD1-202ENST00000526280 MFN1Q8IWA4 741 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 LRRC8AQ8IWT6 810 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 CCAR2Q8N163 923 aaKnown RBP13.34□□□□□ -0.27
SMPD1-202ENST00000526280 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMPD1-202ENST00000526280 CCDC26Q8TAB7 109 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 WFDC5Q8TCV5 224 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 LMLNQ96KR4 655 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 PEBP4Q96S96 227 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 CHRDQ9H2X0 955 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 PPARGC1AQ9UBK2 798 aaKnown RBP13.34□□□□□ -0.27
SMPD1-202ENST00000526280 PCSK1NQ9UHG2 260 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 USP18Q9UMW8 372 aa13.34□□□□□ -0.27
SMPD1-202ENST00000526280 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMPD1-202ENST00000526280 PRRT4C9JH25 899 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 FAM72CH0Y354 149 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 H0Y626 953 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 PRPSAP2O60256 369 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 RNF40O75150 1001 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 CLDN11O75508 207 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 CNTN5O94779 1100 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 PROSCO94903 275 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 CHRM1P11229 460 aaPredicted RBP13.33□□□□□ -0.28
SMPD1-202ENST00000526280 IL1R2P27930 398 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 L1CAMP32004 1257 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 ARHGAP25P42331 645 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 KIR2DL1P43626 348 aaPredicted RBP13.33□□□□□ -0.28
SMPD1-202ENST00000526280 HADHBP55084 474 aaKnown RBP13.33□□□□□ -0.28
SMPD1-202ENST00000526280 CDH4P55283 916 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 GAS6Q14393 721 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 GEN1Q17RS7 908 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 ALFQ53S48 1182 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 FSCBQ5H9T9 825 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 FAM72AQ5TYM5 149 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 FAM72DQ6L9T8 149 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 Q6ZS52 159 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 CHST9Q7L1S5 443 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 ANKS1BQ7Z6G8 1248 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 FAM72BQ86X60 149 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 PSTKQ8IV42 348 aaKnown RBP13.33□□□□□ -0.28
SMPD1-202ENST00000526280 CCDC117Q8IWD4 279 aaPredicted RBP13.33□□□□□ -0.28
SMPD1-202ENST00000526280 PYROXD2Q8N2H3 581 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 CARNMT1Q8N4J0 409 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 ACRBPQ8NEB7 543 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 CCDC112Q8NEF3 446 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 KCNV2Q8TDN2 545 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 IER2Q9BTL4 223 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 ABCB8Q9NUT2 735 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 TFR2Q9UP52 801 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 STARD13Q9Y3M8 1113 aa13.33□□□□□ -0.28
SMPD1-202ENST00000526280 MYO18AQ92614 2054 aaKnown RBP13.33□□□□□ -0.28
SMPD1-202ENST00000526280 ZNF318Q5VUA4 2279 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 DOCK4Q8N1I0 1966 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.32□□□□□ -0.28
SMPD1-202ENST00000526280 A0A0A6YYK5 440 aaPredicted RBP13.32□□□□□ -0.28
SMPD1-202ENST00000526280 RCCD1A6NED2 376 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 ANTXRLA6NF34 631 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 TIMM44O43615 452 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 LRIG2O94898 1065 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 PABPC1P11940 636 aaKnown RBP13.32□□□□□ -0.28
SMPD1-202ENST00000526280 TCF4P15884 667 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 CD70P32970 193 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 MAN1A1P33908 653 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 VAV2P52735 878 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 SEC13P55735 322 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 KRT83P78385 493 aa13.32□□□□□ -0.28
SMPD1-202ENST00000526280 MRPS21P82921 87 aaKnown RBP13.32□□□□□ -0.28
SMPD1-202ENST00000526280 LMAN2Q12907 356 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms