RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 KRT10P13645 584 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 VAV1P15498 845 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 CMA1P23946 247 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 BRD2P25440 801 aaKnown RBP6.83□□□□□ -1.32
CD44-221ENST00000526000 RPL13P26373 211 aaKnown RBP6.83□□□□□ -1.32
CD44-221ENST00000526000 ABCG1P45844 678 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 GRIA4P48058 902 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 MXI1P50539 228 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 METAP1P53582 386 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 DAOAP59103 153 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 RACK1P63244 317 aaKnown RBP6.83□□□□□ -1.32
CD44-221ENST00000526000 CCDC173Q0VFZ6 552 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 DPYDQ12882 1025 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 KCNJ12Q14500 433 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 SMAD1Q15797 465 aaKnown RBP6.83□□□□□ -1.32
CD44-221ENST00000526000 CST6Q15828 149 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 TTC31Q49AM3 519 aaPredicted RBP6.83□□□□□ -1.32
CD44-221ENST00000526000 NADSYN1Q6IA69 706 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 PMF1Q6P1K2 205 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 LRRC69Q6ZNQ3 347 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 MFN1Q8IWA4 741 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 FAM217AQ8IXS0 508 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 APCDD1Q8J025 514 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 AHI1Q8N157 1196 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 FBXL13Q8NEE6 735 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 SLC39A7Q92504 469 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 ERCC4Q92889 916 aaPredicted RBP6.83□□□□□ -1.32
CD44-221ENST00000526000 KAT5Q92993 513 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 SERAC1Q96JX3 654 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 FAM129BQ96TA1 746 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 ELF4Q99607 663 aaPredicted RBP6.83□□□□□ -1.32
CD44-221ENST00000526000 MYOCQ99972 504 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 OSBPL2Q9H1P3 480 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 GDPD2Q9HCC8 539 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 ABCC13Q9NSE7 274 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 OLA1Q9NTK5 396 aaKnown RBP6.83□□□□□ -1.32
CD44-221ENST00000526000 XPO7Q9UIA9 1087 aaKnown RBP6.83□□□□□ -1.32
CD44-221ENST00000526000 ERVW-1Q9UQF0 538 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 NAALADL1Q9UQQ1 740 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 ZZEF1O43149 2961 aa6.83□□□□□ -1.32
CD44-221ENST00000526000 SYNJ2BP-COX16A0A087WUM0 186 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 A0A1W2PPC4 97 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 FAM170AA1A519 330 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 LRRC72A6NJI9 287 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 PYCARD-AS1I3L0S3 204 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 O00370 1275 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 CETN3O15182 167 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 VILLO15195 856 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 MAPK13O15264 365 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 PCDHGA12O60330 932 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 DKK1O94907 266 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 RHOBTB3O94955 611 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 IL1BP01584 269 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 EPB41P11171 864 aaKnown RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 VDRP11473 427 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 CD38P28907 300 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 SLC11A2P49281 568 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 STK19P49842 368 aaPredicted RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 C19orf57Q0VDD7 668 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 BST2Q10589 180 aaKnown RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 CUL2Q13617 745 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 E2F5Q15329 346 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 HNRNPA1L2Q32P51 320 aaKnown RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 ACCSLQ4AC99 568 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 DCAF6Q58WW2 860 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 FAM133BQ5BKY9 247 aaKnown RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 C9orf64Q5T6V5 341 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 HES3Q5TGS1 186 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 ANKRD40Q6AI12 368 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 TMEM270Q6UE05 265 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 KDM7AQ6ZMT4 941 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 KRBA2Q6ZNG9 492 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 RRAGAQ7L523 313 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 KIAA0907Q7Z7F0 614 aaPredicted RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 TMPRSS12Q86WS5 348 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 CIR1Q86X95 450 aaPredicted RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 CCDC117Q8IWD4 279 aaPredicted RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 SCUBE3Q8IX30 993 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 LGI2Q8N0V4 545 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 GUF1Q8N442 669 aaKnown RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 ENGASEQ8NFI3 743 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 FIBINQ8TAL6 211 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 MYO19Q96H55 970 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 LMLNQ96KR4 655 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 MRGPRX3Q96LB0 322 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 ZSWIM1Q9BR11 485 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 NUCKS1Q9H1E3 243 aaKnown RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 PCED1AQ9H1Q7 454 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 RSPH9Q9H1X1 276 aaPredicted RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 GOLPH3LQ9H4A5 285 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 SCUBE2Q9NQ36 999 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 ST7Q9NRC1 585 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 WDR70Q9NW82 654 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 COX16Q9P0S2 106 aa6.82□□□□□ -1.32
CD44-221ENST00000526000 DSPP15924 2871 aaKnown RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 ANKRD11Q6UB99 2663 aaPredicted RBP6.82□□□□□ -1.32
CD44-221ENST00000526000 DMXL2Q8TDJ6 3036 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 A0A087WV48 116 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 A0A1W2PR77 199 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 TRIM49BA6NDI0 452 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms