RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 TRABD2BA6NFA1 517 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 VILLO15195 856 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 LTFP02788 710 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 IGHV4-34P06331 123 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 C21orf59P57076 290 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 TBX4P57082 545 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 CYP4F3Q08477 520 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 LRMPQ12912 555 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 PNOCQ13519 176 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 CAMK2BQ13554 666 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 ARID5BQ14865 1188 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 STILQ15468 1287 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 SMAD1Q15797 465 aaKnown RBP11.09□□□□□ -0.63
VPS26B-203ENST00000525918 CNGA2Q16280 664 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 HNRNPA1L2Q32P51 320 aaKnown RBP11.09□□□□□ -0.63
VPS26B-203ENST00000525918 SOWAHCQ53LP3 525 aaPredicted RBP11.09□□□□□ -0.63
VPS26B-203ENST00000525918 KCNT1Q5JUK3 1230 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 ZNF658Q5TYW1 1059 aaPredicted RBP11.09□□□□□ -0.63
VPS26B-203ENST00000525918 KIAA0895LQ68EN5 471 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 ANKRD40Q6AI12 368 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 TMEM270Q6UE05 265 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 LAYNQ6UX15 382 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 CCDC117Q8IWD4 279 aaPredicted RBP11.09□□□□□ -0.63
VPS26B-203ENST00000525918 PDCD7Q8N8D1 485 aaKnown RBP11.09□□□□□ -0.63
VPS26B-203ENST00000525918 HJURPQ8NCD3 748 aaPredicted RBP11.09□□□□□ -0.63
VPS26B-203ENST00000525918 GANCQ8TET4 914 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 TFAP2BQ92481 460 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 MYO19Q96H55 970 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 LMLNQ96KR4 655 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 HSFY1Q96LI6 401 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 GSDMAQ96QA5 445 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 PABPC3Q9H361 631 aaKnown RBP11.09□□□□□ -0.63
VPS26B-203ENST00000525918 MTG2Q9H4K7 406 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 FBXL12Q9NXK8 326 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 STIM2Q9P246 746 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 LOC400499M0QZD8 3231 aa11.09□□□□□ -0.63
VPS26B-203ENST00000525918 SHROOM3Q8TF72 1996 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 MYLKQ15746 1914 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 A0A1B0GTQ1 180 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 TARSL2A2RTX5 802 aaKnown RBP11.08□□□□□ -0.64
VPS26B-203ENST00000525918 FAM47DPA6NHR8 397 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 LRRC72A6NJI9 287 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 E9PAM4 449 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 PIK3R2O00459 728 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 SIN3BO75182 1162 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 FBXO21O94952 628 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 CSKP41240 450 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 FMO5P49326 533 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 RGS7P49802 495 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 GALCP54803 685 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 LRRC63Q05C16 580 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 NNTQ13423 1086 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 CST6Q15828 149 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 NADSYN1Q6IA69 706 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 MARCH9Q86YJ5 346 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 DHX40Q8IX18 779 aaKnown RBP11.08□□□□□ -0.64
VPS26B-203ENST00000525918 CLEC4CQ8WTT0 213 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 OMDQ99983 421 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 GTPBP4Q9BZE4 634 aaKnown RBP11.08□□□□□ -0.64
VPS26B-203ENST00000525918 METTL14Q9HCE5 456 aaKnown RBP11.08□□□□□ -0.64
VPS26B-203ENST00000525918 FTSJ1Q9UET6 329 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 ADAMTS1Q9UHI8 967 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 INTS6Q9UL03 887 aaKnown RBP11.08□□□□□ -0.64
VPS26B-203ENST00000525918 FZD4Q9ULV1 537 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 TLR6Q9Y2C9 796 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 PCDHB4Q9Y5E5 795 aa11.08□□□□□ -0.64
VPS26B-203ENST00000525918 FASNP49327 2511 aaKnown RBP11.07□□□□□ -0.64
VPS26B-203ENST00000525918 APC2O95996 2303 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 A0A1W2PP55 124 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 FAM149AA5PLN7 773 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 M0QYV0 167 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 RNF225M0QZC1 329 aaPredicted RBP11.07□□□□□ -0.64
VPS26B-203ENST00000525918 PMM2O15305 246 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 MID1O15344 667 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 RNASEH2AO75792 299 aaKnown RBP11.07□□□□□ -0.64
VPS26B-203ENST00000525918 MOCS3O95396 460 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 FYNP06241 537 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 SRPRAP08240 638 aaKnown RBP11.07□□□□□ -0.64
VPS26B-203ENST00000525918 CDK4P11802 303 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 CD38P28907 300 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 SLC8A1P32418 973 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 PMS1P54277 932 aaKnown RBP11.07□□□□□ -0.64
VPS26B-203ENST00000525918 RPS24P62847 133 aaKnown RBP11.07□□□□□ -0.64
VPS26B-203ENST00000525918 IL9RQ01113 521 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 CETN1Q12798 172 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 CDH18Q13634 790 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 CCDC157Q569K6 752 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 MS4A13Q5J8X5 152 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 C9orf64Q5T6V5 341 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 NCEH1Q6PIU2 408 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 DHRS13Q6UX07 377 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 TMPRSS12Q86WS5 348 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 MMAAQ8IVH4 418 aaKnown RBP11.07□□□□□ -0.64
VPS26B-203ENST00000525918 SCUBE3Q8IX30 993 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 PPM1KQ8N3J5 372 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 CARNMT1Q8N4J0 409 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 OR2T34Q8NGX1 318 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 LRIG1Q96JA1 1093 aa11.07□□□□□ -0.64
VPS26B-203ENST00000525918 FCRL2Q96LA5 508 aaPredicted RBP11.07□□□□□ -0.64
VPS26B-203ENST00000525918 MRGPRX3Q96LB0 322 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms