RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-216	ENST00000525506	XPO7	Q9UIA9	1087 aa	Known RBP	10.85	□□□□□ -0.67
RBBP4-216	ENST00000525506	PAXBP1	Q9Y5B6	917 aa		10.85	□□□□□ -0.67
RBBP4-216	ENST00000525506	TPR	P12270	2363 aa	Known RBP	10.85	□□□□□ -0.67
RBBP4-216	ENST00000525506		A0A1W2PQJ5	194 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	FAM170A	A1A519	330 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	CDX4	O14627	284 aa	Predicted RBP	10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	TEX33	O43247	280 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	AP5Z1	O43299	807 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	ACSL4	O60488	711 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	TRUB2	O95900	331 aa	Known RBP	10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	MOCS2	O96007	188 aa	Predicted RBP	10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	APOE	P02649	317 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	MME	P08473	750 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	UNG	P13051	313 aa	Predicted RBP	10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	CCR1	P32246	355 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	PITX1	P78337	314 aa	Predicted RBP	10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	ZNF33A	Q06730	810 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	ENPP2	Q13822	863 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	STARD3	Q14849	445 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	TAF5	Q15542	800 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	UAP1L1	Q3KQV9	507 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	DCAF6	Q58WW2	860 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	PIK3R6	Q5UE93	754 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	SLC36A4	Q6YBV0	504 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	CHST9	Q7L1S5	443 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	XYLT1	Q86Y38	959 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	SYT12	Q8IV01	421 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	UCMA	Q8WVF2	138 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	BAP1	Q92560	729 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	BTN2A3P	Q96KV6	586 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	NUCKS1	Q9H1E3	243 aa	Known RBP	10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	PRDM16	Q9HAZ2	1276 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	PILRB	Q9UKJ0	227 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	STAP1	Q9ULZ2	295 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	PCDH15	Q96QU1	1955 aa		10.84	□□□□□ -0.67
RBBP4-216	ENST00000525506	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	CACNA1E	Q15878	2313 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	KNL1	Q8NG31	2342 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	TYW5	A2RUC4	315 aa	Known RBP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	GIPC1	O14908	333 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	SYNCRIP	O60506	623 aa	Known RBP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	NDUFS2	O75306	463 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	ZNF217	O75362	1048 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	F9	P00740	461 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	CFI	P05156	583 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	TPM3	P06753	285 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	EPHX1	P07099	455 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	ADRB1	P08588	477 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	PABPC1	P11940	636 aa	Known RBP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	CHRNB2	P17787	502 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	MAOB	P27338	520 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	CD70	P32970	193 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	PBX1	P40424	430 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	PRKCI	P41743	596 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	MAPK8	P45983	427 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	NSF	P46459	744 aa	Known RBP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	NUMB	P49757	651 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	COPA	P53621	1224 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	RPS24	P62847	133 aa	Known RBP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	FANCC	Q00597	558 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	ARID5A	Q03989	594 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	FNDC3B	Q53EP0	1204 aa	Known RBP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	TTC39B	Q5VTQ0	682 aa	Predicted RBP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	TAF3	Q5VWG9	929 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	NAA35	Q5VZE5	725 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	OR6B2	Q6IFH4	312 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	LRSAM1	Q6UWE0	723 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	SERPINA13P	Q6UXR4	307 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	ADIPOR2	Q86V24	386 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	PHF13	Q86YI8	300 aa	Predicted RBP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	TMPRSS6	Q8IU80	811 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	DEFB106A	Q8N104	65 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	CFAP52	Q8N1V2	620 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	SLC20A1	Q8WUM9	679 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	HSPA12B	Q96MM6	686 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	PRICKLE1	Q96MT3	831 aa	Predicted RBP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	CNTNAP3B	Q96NU0	1288 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	NPY6R	Q99463	290 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	SYT11	Q9BT88	431 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	CNTNAP3	Q9BZ76	1288 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	MTG2	Q9H4K7	406 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	FAM204A	Q9H8W3	233 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	TMEM9B	Q9NQ34	198 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	AIPL1	Q9NZN9	384 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	SLC12A6	Q9UHW9	1150 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	GGA2	Q9UJY4	613 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	ITIH6	Q6UXX5	1313 aa		10.83	□□□□□ -0.68
RBBP4-216	ENST00000525506	SYNJ2BP-COX16	A0A087WUM0	186 aa		10.82	□□□□□ -0.68
RBBP4-216	ENST00000525506	KCNU1	A8MYU2	1149 aa		10.82	□□□□□ -0.68
RBBP4-216	ENST00000525506	TIMM44	O43615	452 aa		10.82	□□□□□ -0.68
RBBP4-216	ENST00000525506	GRAP2	O75791	330 aa		10.82	□□□□□ -0.68
RBBP4-216	ENST00000525506	KCNK5	O95279	499 aa		10.82	□□□□□ -0.68
RBBP4-216	ENST00000525506	CALB1	P05937	261 aa		10.82	□□□□□ -0.68
RBBP4-216	ENST00000525506	ENG	P17813	658 aa		10.82	□□□□□ -0.68
RBBP4-216	ENST00000525506	ABCB4	P21439	1286 aa		10.82	□□□□□ -0.68

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