RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CYP1A1P04798 512 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 ATP5BP06576 529 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 ZNF806P0C7X5 589 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 FLT3P36888 993 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 CSKP41240 450 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 PTGER3P43115 390 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 IRAK1P51617 712 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 ATXN1P54253 815 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 ARHGAP8P85298 464 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 RPL6Q02878 288 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 DEUP1Q05D60 604 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 IQCB1Q15051 598 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 PTPRNQ16849 979 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 KLHL40Q2TBA0 621 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 AASDHQ4L235 1098 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 PLA2G2CQ5R387 149 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 TRNP1Q6NT89 227 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 FBXL22Q6P050 247 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 CYP2U1Q7Z449 544 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 C14orf80Q86SX3 495 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 TMPRSS6Q8IU80 811 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 EMC1Q8N766 993 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 C12orf50Q8NA57 414 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 MSANTD4Q8NCY6 345 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 PIGKQ92643 395 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 IGSF8Q969P0 613 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 NAP1L5Q96NT1 182 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 C11orf70Q9BRQ4 267 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 MTG2Q9H4K7 406 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 WDCPQ9H6R7 721 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 PRDM16Q9HAZ2 1276 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 ANLNQ9NQW6 1124 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 METTL5Q9NRN9 209 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 TMPRSS4Q9NRS4 437 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 RXFP3Q9NSD7 469 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 SEPT11Q9NVA2 429 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 VANGL2Q9ULK5 521 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 STAP1Q9ULZ2 295 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 DAAM1Q9Y4D1 1078 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 PCDHGA5Q9Y5G8 931 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 HS3ST4Q9Y661 456 aa13.28□□□□□ -0.28
TRAPPC4-205ENST00000525079 PATE3B3GLJ2 98 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 DLDP09622 509 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 SCNN1AP37088 669 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 CTSOP43234 321 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 COPAP53621 1224 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 CENPCQ03188 943 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 AUHQ13825 339 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 E2F5Q15329 346 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 PITRM1Q5JRX3 1037 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 APCDD1Q8J025 514 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 CCAR2Q8N163 923 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 SIPA1Q96FS4 1042 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 CFAP57Q96MR6 1250 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 RPRD1AQ96P16 312 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 TKTL2Q9H0I9 626 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 TMEM245Q9H330 911 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 CBX8Q9HC52 389 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 VPS45Q9NRW7 570 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 RRN3Q9NYV6 651 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 KIAA1522Q9P206 1035 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 TMEM59LQ9UK28 342 aa13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 CDV3Q9UKY7 258 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 ATXN2Q99700 1313 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 MUC22E2RYF6 1773 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC4-205ENST00000525079 I6L893 689 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 ZNF217O75362 1048 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 UNGP13051 313 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 PDGFRAP16234 1089 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 MMP8P22894 467 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 CXCR3P49682 368 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 ATP11AP98196 1134 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 PUM1Q14671 1186 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 CLEC16AQ2KHT3 1053 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 SLC25A52Q3SY17 297 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 FILIP1LQ4L180 1135 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 RAB6CQ53S08 254 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 RABGAP1LQ5R372 815 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 SLC36A4Q6YBV0 504 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 TRIM72Q6ZMU5 477 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 SND1Q7KZF4 910 aaKnown RBP eCLIP13.26□□□□□ -0.293e-8■■□□□ 12.3
TRAPPC4-205ENST00000525079 LUZP1Q86V48 1076 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 ZNF557Q8N988 423 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 JOSD2Q8TAC2 188 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 CEP192Q8TEP8 1941 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 PRCCQ92733 491 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 NT5C3BQ969T7 300 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 TTC17Q96AE7 1141 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 AGPAT1Q99943 283 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 RAB6CQ9H0N0 254 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 PRSS16Q9NQE7 514 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 ITM2CQ9NQX7 267 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 TMEM74BQ9NUR3 256 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 ARHGEF38Q9NXL2 777 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 DLL3Q9NYJ7 618 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 ERVW-1Q9UQF0 538 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 PLXND1Q9Y4D7 1925 aa13.26□□□□□ -0.29
TRAPPC4-205ENST00000525079 NUP205Q92621 2012 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 DCDC2BA2VCK2 349 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 AP5Z1O43299 807 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms