RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356		H7C0S8	307 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	ASNA1	O43681	348 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	FAM155B	O75949	473 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	HSPA4L	O95757	839 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	STARD3NL	O95772	234 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	NDST3	O95803	873 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	GYS1	P13807	737 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	TYR	P14679	529 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	ALOX12	P18054	663 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	CERS1	P27544	350 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	HOXD13	P35453	343 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	POLD2	P49005	469 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	PAPOLA	P51003	745 aa	Known RBP	4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	COPA	P53621	1224 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	PRKAA2	P54646	552 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	RPS16	P62249	146 aa	Known RBP	4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	PPP3CA	Q08209	521 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	CDC16	Q13042	620 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	CUL4A	Q13619	759 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	UBXN2B	Q14CS0	331 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	RAB30	Q15771	203 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	MST1L	Q2TV78	715 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	ADCK5	Q3MIX3	580 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	DNAJC21	Q5F1R6	531 aa	Known RBP	4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	THEMIS2	Q5TEJ8	643 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	AFMID	Q63HM1	303 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	SUMO4	Q6EEV6	95 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	ZNF449	Q6P9G9	518 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	B4GALNT4	Q76KP1	1039 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	HEATR3	Q7Z4Q2	680 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	AFAP1L1	Q8TED9	768 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	ST8SIA4	Q92187	359 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	MAML1	Q92585	1016 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	RUBCN	Q92622	972 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	MTFMT	Q96DP5	389 aa	Known RBP	4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	IQCD	Q96DY2	449 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	MARS2	Q96GW9	593 aa	Known RBP	4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	MRGPRX1	Q96LB2	322 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	TIGD1	Q96MW7	591 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	HAPLN3	Q96S86	360 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	XPO4	Q9C0E2	1151 aa	Known RBP	4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	PAIP1	Q9H074	479 aa	Known RBP	4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	DBNDD1	Q9H9R9	158 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	LMBRD1	Q9NUN5	540 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	HAUS2	Q9NVX0	235 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	FBXO34	Q9NWN3	711 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	CPA4	Q9UI42	421 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	ODF2L	Q9ULJ1	636 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	CDY2A	Q9Y6F7	541 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	PARP4	Q9UKK3	1724 aa	Known RBP	4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	TULP4	Q9NRJ4	1543 aa		4.71	□□□□□ -1.66
PCM1-223	ENST00000524356	KNDC1	Q76NI1	1749 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356		A0A0G2JLW4	131 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	PIP5K1B	O14986	540 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	PTP4A3	O75365	173 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	MLYCD	O95822	493 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	HSPA1A	P0DMV8	641 aa	Known RBP	4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	HSPA1B	P0DMV9	641 aa	Known RBP	4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	EN2	P19622	333 aa	Predicted RBP	4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	MAPK4	P31152	587 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	MCAM	P43121	646 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	MMP14	P50281	582 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	PNLIPRP1	P54315	467 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	UBE3A	Q05086	875 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	EFR3A	Q14156	821 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	PKN2	Q16513	984 aa	Known RBP	4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	ANKRD45	Q5TZF3	282 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	ATG9B	Q674R7	924 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	ACAD10	Q6JQN1	1059 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	RPUSD3	Q6P087	351 aa	Known RBP	4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	FBXO38	Q6PIJ6	1188 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	FAM47E	Q6ZV65	393 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	TTC7B	Q86TV6	843 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	CHD1L	Q86WJ1	897 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	VSIG1	Q86XK7	387 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	KRT73	Q86Y46	540 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	OR1N1	Q8NGS0	311 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	OR14C36	Q8NHC7	312 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	LPIN2	Q92539	896 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	TBC1D31	Q96DN5	1066 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	DMRTA2	Q96SC8	542 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	ADPGK	Q9BRR6	497 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	MRPL9	Q9BYD2	267 aa	Known RBP	4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	TM7SF3	Q9NS93	570 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	SACM1L	Q9NTJ5	587 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	FAM30A	Q9NZY2	134 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	ADD3	Q9UEY8	706 aa	Known RBP	4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	ABCF2	Q9UG63	623 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	TMCC3	Q9ULS5	477 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	ZNF711	Q9Y462	761 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	PCDHA3	Q9Y5H8	950 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	LRRC37A3	O60309	1634 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	PAPPA	Q13219	1627 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	COL18A1	P39060	1754 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	IGSF1	Q8N6C5	1336 aa		4.7	□□□□□ -1.66
PCM1-223	ENST00000524356	HNRNPDL	O14979	420 aa	Known RBP	4.69	□□□□□ -1.66
PCM1-223	ENST00000524356	GJB3	O75712	270 aa		4.69	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms