RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 CMASQ8NFW8 434 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 TNIP2Q8NFZ5 429 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 SERPINI1Q99574 410 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 PKP2Q99959 881 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 FTHL17Q9BXU8 183 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 C12orf10Q9HB07 376 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 MYRFQ9Y2G1 1151 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 CORINQ9Y5Q5 1042 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 ANKRD31Q8N7Z5 1873 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 PLXNA1Q9UIW2 1896 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 H0Y858 1186 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 ZBTB5O15062 677 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 MSI1O43347 362 aaKnown RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 PRSS23O95084 383 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 PTPN1P18031 435 aaKnown RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 NELFEP18615 380 aaKnown RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 RIOX2Q8IUF8 465 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 LIX1LQ8IVB5 337 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 TTC39CQ8N584 583 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 PPM1NQ8N819 430 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 SEMA4DQ92854 862 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 CCDC127Q96BQ5 260 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 DYNLL2Q96FJ2 89 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 EBF4Q9BQW3 602 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 COPS7BQ9H9Q2 264 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 TLR9Q9NR96 1032 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 TOPORSQ9NS56 1045 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 TFCP2L1Q9NZI6 479 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 STYXL1Q9Y6J8 313 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 ARHGEF37A1IGU5 675 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 TTC34A8MYJ7 566 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 CFLARO15519 480 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 USP17L8P0C7I0 530 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 ZSCAN5DPP0CG00 497 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 COX4I1P13073 169 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 GRK2P25098 689 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 EPHA3P29320 983 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 ZNF76P36508 570 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 KPNA1P52294 538 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 NLRP11P59045 1033 aaKnown RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 NFATC3Q12968 1075 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 TRPC3Q13507 836 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 NR1D2Q14995 579 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 LGSNQ5TDP6 509 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 XAF1Q6GPH4 301 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 SPOCD1Q6ZMY3 1216 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 ZBTB46Q86UZ6 589 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 RHPN2Q8IUC4 686 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 CNTD1Q8N815 330 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 PIK3C3Q8NEB9 887 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 PIGBQ92521 554 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 WRNIP1Q96S55 665 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 ACO2Q99798 780 aaKnown RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 TMEM8AQ9HCN3 771 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 KCNQ5Q9NR82 932 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 ATP11BQ9Y2G3 1177 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 PCDHB12Q9Y5F1 795 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 UBR3Q6ZT12 1888 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 CNTNAP4Q9C0A0 1308 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 GREB1Q4ZG55 1949 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 A0A087WXM4 84 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 ZBTB14O43829 449 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 FKBP9O95302 570 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 GYS1P13807 737 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 SCNN1DP51172 638 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 OTUD4Q01804 1114 aaKnown RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 UBE2SQ16763 222 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 OTOP1Q7RTM1 612 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 SETD3Q86TU7 594 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 BPHLQ86WA6 291 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 KIAA1958Q8N8K9 716 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 RP9Q8TA86 221 aaKnown RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 PACSIN3Q9UKS6 424 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 RAD54BQ9Y620 910 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 MYLKQ15746 1914 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 HTRA2O43464 458 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 BANF1O75531 89 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 ATG7O95352 703 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 APOEP02649 317 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 BMP3P12645 472 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 CD247P20963 164 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 CDK8P49336 464 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 VAMP7P51809 220 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 ATXN3P54252 364 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 MLLT10P55197 1068 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 PHC1P78364 1004 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 ADARB1P78563 741 aaKnown RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 MRPS22P82650 360 aaKnown RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 COG2Q14746 738 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 RSBN1LQ6PCB5 846 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 CYP4V2Q6ZWL3 525 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 TRMT1LQ7Z2T5 733 aaKnown RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 VN1R5Q7Z5H4 357 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 IFNLR1Q8IU57 520 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 RMND5BQ96G75 393 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 NXF2Q9GZY0 626 aaKnown RBP8.58□□□□□ -1.04
CSMD1-213ENST00000523488 CPNE5Q9HCH3 593 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 ANKHQ9HCJ1 492 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 SMYD2Q9NRG4 433 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 ARHGAP26Q9UNA1 814 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms