RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 PITX1P78337 314 aaPredicted RBP16■□□□□ 0.15
MRPS28-209ENST00000522987 TEAD4Q15561 434 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 SYPL2Q5VXT5 272 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 RAP1GAP2Q684P5 730 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 NUGGCQ68CJ6 796 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 IL27RAQ6UWB1 636 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 TAC4Q86UU9 113 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 CIR1Q86X95 450 aaPredicted RBP16■□□□□ 0.15
MRPS28-209ENST00000522987 PROSER1Q86XN7 944 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 LGI2Q8N0V4 545 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 SCML4Q8N228 414 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 SPATA20Q8TB22 786 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 IRGQQ8WZA9 623 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 MYO19Q96H55 970 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 LMLNQ96KR4 655 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 RPL10LQ96L21 214 aaKnown RBP16■□□□□ 0.15
MRPS28-209ENST00000522987 KREMEN1Q96MU8 473 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 SLC6A18Q96N87 628 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 ACP6Q9NPH0 428 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 TOR4AQ9NXH8 423 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 FBXL12Q9NXK8 326 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 SUN2Q9UH99 717 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 ACACAQ13085 2346 aa16■□□□□ 0.15
MRPS28-209ENST00000522987 SYNJ2BP-COX16A0A087WUM0 186 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 A0A1W2PP55 124 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 FAM221BA6H8Z2 402 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 BMP6P22004 513 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 PSMD8P48556 350 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 STK19P49842 368 aaPredicted RBP15.99■□□□□ 0.15
MRPS28-209ENST00000522987 CDH18Q13634 790 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 DCAF6Q58WW2 860 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 PITRM1Q5JRX3 1037 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 KIAA0895LQ68EN5 471 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 TTI2Q6NXR4 508 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 LRSAM1Q6UWE0 723 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 CCNI2Q6ZMN8 369 aaPredicted RBP15.99■□□□□ 0.15
MRPS28-209ENST00000522987 CHSY1Q86X52 802 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 MMAAQ8IVH4 418 aaKnown RBP15.99■□□□□ 0.15
MRPS28-209ENST00000522987 APCDD1Q8J025 514 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 DHTKD1Q96HY7 919 aaPredicted RBP15.99■□□□□ 0.15
MRPS28-209ENST00000522987 MRGPRX3Q96LB0 322 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 CEP63Q96MT8 703 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 PABPC3Q9H361 631 aaKnown RBP15.99■□□□□ 0.15
MRPS28-209ENST00000522987 COX16Q9P0S2 106 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 TJP2Q9UDY2 1190 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 ERVW-1Q9UQF0 538 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 NCKAP1Q9Y2A7 1128 aa15.99■□□□□ 0.15
MRPS28-209ENST00000522987 FAM170AA1A519 330 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 TYW5A2RUC4 315 aaKnown RBP15.98■□□□□ 0.15
MRPS28-209ENST00000522987 PPP1R3GB7ZBB8 358 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 CBX4O00257 560 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 PLK4O00444 970 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 CAPN9O14815 690 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 FLRT2O43155 660 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 RNASEH2AO75792 299 aaKnown RBP15.98■□□□□ 0.15
MRPS28-209ENST00000522987 FBXO21O94952 628 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 LETM1O95202 739 aaPredicted RBP15.98■□□□□ 0.15
MRPS28-209ENST00000522987 CAPNS1P04632 268 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 IGHV4-34P06331 123 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 ZNF883P0CG24 379 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 CD27P26842 260 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 CLDN6P56747 220 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 KCNH2Q12809 1159 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 ZC3H12AQ5D1E8 599 aaKnown RBP15.98■□□□□ 0.15
MRPS28-209ENST00000522987 MS4A13Q5J8X5 152 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 GJB7Q6PEY0 223 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 NCEH1Q6PIU2 408 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 GATAD2AQ86YP4 633 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 CREBRFQ8IUR6 639 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 EHBP1Q8NDI1 1231 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 NBEAQ8NFP9 2946 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 FIBINQ8TAL6 211 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 BAHD1Q8TBE0 780 aaPredicted RBP15.98■□□□□ 0.15
MRPS28-209ENST00000522987 HSFY1Q96LI6 401 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 SERPINB11Q96P15 392 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 ORAI3Q9BRQ5 295 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 GTPBP4Q9BZE4 634 aaKnown RBP15.98■□□□□ 0.15
MRPS28-209ENST00000522987 INTS2Q9H0H0 1204 aaKnown RBP15.98■□□□□ 0.15
MRPS28-209ENST00000522987 PCED1AQ9H1Q7 454 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 RSPH9Q9H1X1 276 aaPredicted RBP15.98■□□□□ 0.15
MRPS28-209ENST00000522987 NEUROG2Q9H2A3 272 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 CCDC86Q9H6F5 360 aaKnown RBP15.98■□□□□ 0.15
MRPS28-209ENST00000522987 EBF2Q9HAK2 575 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 CYTH4Q9UIA0 394 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 SLCO3A1Q9UIG8 710 aa15.98■□□□□ 0.15
MRPS28-209ENST00000522987 APC2O95996 2303 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 E5RJQ4 531 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 WNT9AO14904 365 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 IRAK2O43187 625 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 LUC7L3O95232 432 aaKnown RBP15.97■□□□□ 0.15
MRPS28-209ENST00000522987 VAV1P15498 845 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 GPD2P43304 727 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 GRIA4P48058 902 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 CCT8P50990 548 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 GALCP54803 685 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 APBA1Q02410 837 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 CETN1Q12798 172 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 STILQ15468 1287 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 TAF5Q15542 800 aa15.97■□□□□ 0.15
MRPS28-209ENST00000522987 CST6Q15828 149 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms