RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.8□□□□□ -0.2
CLK4-210ENST00000522136 TUBB2BQ9BVA1 445 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 CARD6Q9BX69 1037 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 L2HGDHQ9H9P8 463 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 WNT6Q9Y6F9 365 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 HEPACAM2A8MVW5 462 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 ZNF487B1APH4 448 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 APOL1O14791 398 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 DCLK1O15075 740 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 MBTPS2O43462 519 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 TJP3O95049 919 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 LATS1O95835 1130 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 PECAM1P16284 738 aaPredicted RBP13.8□□□□□ -0.2
CLK4-210ENST00000522136 HOXC13P31276 330 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 MTA1Q13330 715 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 NCBP2-AS2Q69YL0 99 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 SLC9A4Q6AI14 798 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 TFAP2DQ7Z6R9 452 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 LRRN4CLQ8ND94 238 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 C1orf54Q8WWF1 131 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 BHMTQ93088 406 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 HLA-CQ95604 372 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 NECTIN4Q96NY8 510 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 NDFIP2Q9NV92 336 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 STIM2Q9P246 746 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 RNF14Q9UBS8 474 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 EFR3BQ9Y2G0 817 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 ZFP37Q9Y6Q3 630 aaPredicted RBP13.8□□□□□ -0.2
CLK4-210ENST00000522136 IGLV3-10A0A075B6K4 115 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 DRGXA6NNA5 263 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 KRIT1O00522 736 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 TCF3P15923 654 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 SLC10A2Q12908 348 aaPredicted RBP13.79□□□□□ -0.2
CLK4-210ENST00000522136 KCTD19Q17RG1 926 aaPredicted RBP13.79□□□□□ -0.2
CLK4-210ENST00000522136 PARM1Q6UWI2 310 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 TPGS1Q6ZTW0 290 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 TP53INP2Q8IXH6 220 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 FAM217AQ8IXS0 508 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 ATG4AQ8WYN0 398 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 PLA2G2FQ9BZM2 168 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 ZYG11BQ9C0D3 744 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 KIF9Q9HAQ2 790 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 TRPV4Q9HBA0 871 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 ZNF510Q9Y2H8 683 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 HEY1Q9Y5J3 304 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 XIRP2A4UGR9 3374 aa13.79□□□□□ -0.2
CLK4-210ENST00000522136 GFRA2O00451 464 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 ZNF135P52742 658 aaPredicted RBP13.78□□□□□ -0.2
CLK4-210ENST00000522136 GBE1Q04446 702 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 C2orf54Q08AI8 447 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 SMAD4Q13485 552 aaKnown RBP13.78□□□□□ -0.2
CLK4-210ENST00000522136 TFDP2Q14188 446 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 B4GALNT4Q76KP1 1039 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 NLRP14Q86W24 1093 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 NPWQ8N729 165 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 PRELID2Q8N945 189 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 TDRD5Q8NAT2 981 aaKnown RBP13.78□□□□□ -0.2
CLK4-210ENST00000522136 BPIFB1Q8TDL5 484 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 LRRN4Q8WUT4 740 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 ASIC4Q96FT7 647 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 ZFYVE19Q96K21 471 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 DDX50Q9BQ39 737 aaKnown RBP13.78□□□□□ -0.2
CLK4-210ENST00000522136 KXD1Q9BQD3 176 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 RPP25Q9BUL9 199 aaKnown RBP13.78□□□□□ -0.2
CLK4-210ENST00000522136 ZFP14Q9HCL3 533 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 PRDM6Q9NQX0 595 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 RBM12Q9NTZ6 932 aaKnown RBP13.78□□□□□ -0.2
CLK4-210ENST00000522136 PLK2Q9NYY3 685 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 PPARGC1AQ9UBK2 798 aaKnown RBP13.78□□□□□ -0.2
CLK4-210ENST00000522136 PRUNE2Q8WUY3 3088 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 MFSD11O43934 449 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 TBL1XO60907 577 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 CKAP4Q07065 602 aaKnown RBP13.78□□□□□ -0.2
CLK4-210ENST00000522136 SNX1Q13596 522 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 C5orf22Q49AR2 442 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 ACBD5Q5T8D3 534 aaPredicted RBP13.78□□□□□ -0.2
CLK4-210ENST00000522136 TRIM68Q6AZZ1 485 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 TMCO3Q6UWJ1 677 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 VITQ6UXI7 678 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 TMEM25Q86YD3 366 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 SPATA4Q8NEY3 305 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 ACTL9Q8TC94 416 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 FGF14Q92915 247 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 TMA16Q96EY4 203 aaKnown RBP13.78□□□□□ -0.2
CLK4-210ENST00000522136 CELF6Q96J87 481 aaKnown RBP13.78□□□□□ -0.2
CLK4-210ENST00000522136 NAP1L3Q99457 506 aaPredicted RBP13.78□□□□□ -0.2
CLK4-210ENST00000522136 KLC2Q9H0B6 622 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 CATSPERBQ9H7T0 1116 aa13.78□□□□□ -0.2
CLK4-210ENST00000522136 FGF10O15520 208 aaPredicted RBP13.77□□□□□ -0.21
CLK4-210ENST00000522136 RHOQP17081 205 aa13.77□□□□□ -0.21
CLK4-210ENST00000522136 HTR7P34969 479 aa13.77□□□□□ -0.21
CLK4-210ENST00000522136 CHKAP35790 457 aa13.77□□□□□ -0.21
CLK4-210ENST00000522136 NUMBP49757 651 aa13.77□□□□□ -0.21
CLK4-210ENST00000522136 OTUD4Q01804 1114 aaKnown RBP13.77□□□□□ -0.21
CLK4-210ENST00000522136 GRM2Q14416 872 aa13.77□□□□□ -0.21
CLK4-210ENST00000522136 RABGAP1LQ5R372 815 aa13.77□□□□□ -0.21
CLK4-210ENST00000522136 ADGRG2Q8IZP9 1017 aa13.77□□□□□ -0.21
CLK4-210ENST00000522136 CPXM2Q8N436 756 aa13.77□□□□□ -0.21
CLK4-210ENST00000522136 RTL3Q8N8U3 475 aaKnown RBP13.77□□□□□ -0.21
CLK4-210ENST00000522136 C10orf88Q9H8K7 445 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms